fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G47710.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os011454 not found in 92aa AT1G26945.1 1st_not 0.647398843 II
Os011458 not found in 91aa AT1G26945.1 not_not 0.508670520 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G47710.1     MSSRKSRSRQTGASMITDEQINDLVLQLHRLLPELANNRRSGKVSASRVLQETCSYIRNL
Os011458_Os03t0 MSSR--RGGGGGGGRITDEEINELISKLQALLPESSRSRGASRSSASKLLKETCSYIKSL
Os011454_Os03t0 MSSRRSRSRQSGSSRITDEQISDLVSKLQDLLPE-ARLRSNDRVPSSRVLQETCNYIRSL
                ****  *.   *.. ****:*.:*: :*: **** :. *  .: .:*::*:***.**:.*

AT3G47710.1     SKEVDDLSERLSQLLESTD--SAQAALIRSLLMQ
Os011458_Os03t0 HREVDDLSDRLSELMSTMDNNSPQAEIIRSLLR-
Os011454_Os03t0 HQEVDDLSERLSELLATSDMSSAQAAIIRSLLM-
                 :******:***:*: : *  *.** :*****
BoxShade v3.31 C (beta, 970507) Output
AT3G47710.1     M S S R K S R S R Q T G A S M I T D E Q I N D L V L Q L H R L L P E L A N N R R S G K V S A S R V L Q E T C S Y I R N L
Os011458_Os03t0    M S S R - - R G G G G G G G R I T D E E I N E L I S K L Q A L L P E S S R S R G A S R S S A S K L L K E T C S Y I K S L
Os011454_Os03t0    M S S R R S R S R Q S G S S R I T D E Q I S D L V S K L Q D L L P E - A R L R S N D R V P S S R V L Q E T C N Y I R S L
 
AT3G47710.1     S K E V D D L S E R L S Q L L E S T D - - S A Q A A L I R S L L M Q
Os011458_Os03t0    H R E V D D L S D R L S E L M S T M D N N S P Q A E I I R S L L R -
Os011454_Os03t0    H Q E V D D L S E R L S E L L A T S D M S S A Q A A I I R S L L M -
 
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