fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G47710.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb022206 not found in 213aa AT1G26945.1 1st_not 0.624277456 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G47710.1     ----------------------------------------MSSRKSRSRQTGASMITDEQ
Sb022206_Sorbi1 LPFHHLCISNLLASLLTSQFVSRSLAKLLSPISQTTTSTKMSSRRSRSRQSGSSRITEEQ
                                                        ****:*****:*:* **:**

AT3G47710.1     INDLVLQLHRLLPELANNRRSGKVSASRVLQETCSYIRNLSKEVDDLSERLSQLLESTD-
Sb022206_Sorbi1 ISDLVSKLQDLLPE-ARLQSNARVPSARVLQETCNYIRSLHQEVDDLSERLSELLATSDM
                *.*** :*: **** *. : ..:*.::*******.***.* :**********:** ::* 

AT3G47710.1     -SAQAALIRSLLMQ
Sb022206_Sorbi1 SSAQAAVIRSLLM-
                 *****:******
BoxShade v3.31 C (beta, 970507) Output
AT3G47710.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S S R K S R S R Q T G A S M I T D E Q
Sb022206_Sorbi1    L P F H H L C I S N L L A S L L T S Q F V S R S L A K L L S P I S Q T T T S T K M S S R R S R S R Q S G S S R I T E E Q
 
AT3G47710.1     I N D L V L Q L H R L L P E L A N N R R S G K V S A S R V L Q E T C S Y I R N L S K E V D D L S E R L S Q L L E S T D -
Sb022206_Sorbi1    I S D L V S K L Q D L L P E - A R L Q S N A R V P S A R V L Q E T C N Y I R S L H Q E V D D L S E R L S E L L A T S D M
 
AT3G47710.1     - S A Q A A L I R S L L M Q
Sb022206_Sorbi1    S S A Q A A V I R S L L M -
 
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