|
|
|
|
|
|
|
|
| Input | Putative repression domain | ||||
|---|---|---|---|---|---|
| AT3G47710.1 | not found | ||||
| Ortholog | Putative repression domain | Reverse top hit | Relation | Blast score ratio | Type |
| Sb002496 | not found in 86aa | AT3G28857.1 | not_not | 0.468208092 | III |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT3G47710.1 MSS-RKSRSRQTGASMITDEQINDLVLQLHRLLPELANNRRSGKVSASRVLQETCSYIRN
Sb002496_Sorbi1 MSSGRRGR--------ISDDEINELISKLQALLPESSRRRNASRSSASKLLKETCAYIKS
*** *:.* *:*::**:*: :*: **** :..*.:.: ***::*:***:**:.
AT3G47710.1 LSKEVDDLSERLSQLLES--TDSAQAALIRSLLMQ
Sb002496_Sorbi1 LHREVDDLSERLSGLMSTMDNDSPQAEIIRSLLR-
* :********** *:.: .**.** :*****
| AT3G47710.1 | M | S | S | - | R | K | S | R | S | R | Q | T | G | A | S | M | I | T | D | E | Q | I | N | D | L | V | L | Q | L | H | R | L | L | P | E | L | A | N | N | R | R | S | G | K | V | S | A | S | R | V | L | Q | E | T | C | S | Y | I | R | N |
| Sb002496_Sorbi1 | M | S | S | G | R | R | G | R | - | - | - | - | - | - | - | - | I | S | D | D | E | I | N | E | L | I | S | K | L | Q | A | L | L | P | E | S | S | R | R | R | N | A | S | R | S | S | A | S | K | L | L | K | E | T | C | A | Y | I | K | S |
| AT3G47710.1 | L | S | K | E | V | D | D | L | S | E | R | L | S | Q | L | L | E | S | - | - | T | D | S | A | Q | A | A | L | I | R | S | L | L | M | Q | |||||||||||||||||||||||||
| Sb002496_Sorbi1 | L | H | R | E | V | D | D | L | S | E | R | L | S | G | L | M | S | T | M | D | N | D | S | P | Q | A | E | I | I | R | S | L | L | R | - | |||||||||||||||||||||||||