fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G47710.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm010049 not found in 92aa AT1G74500.1 1st_not 0.710982658 II

Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G47710.1     MSSRKSRSRQTGASM-ITDEQINDLVLQLHRLLPELANNRRSGKVSASRVLQETCSYIRN
gm010049_Glyma0 MSSRRSRSRQTSSSRNITDDQINDLVSKLQQLLPEI-RDRRSDKVSASKVLQETCNYIRS
                ****:******.:*  ***:****** :*::****: .:***.*****:******.***.

AT3G47710.1     LSKEVDDLSERLSQLLESTDSAQAALIRSLLMQ
gm010049_Glyma0 LHREVDDLSERLSELLATTDTAQAAIIRNLLMQ
                * :**********:** :**:****:**.****


BoxShade v3.31 C (beta, 970507) Output
AT3G47710.1     M S S R K S R S R Q T G A S M - I T D E Q I N D L V L Q L H R L L P E L A N N R R S G K V S A S R V L Q E T C S Y I R N
gm010049_Glyma0    M S S R R S R S R Q T S S S R N I T D D Q I N D L V S K L Q Q L L P E I - R D R R S D K V S A S K V L Q E T C N Y I R S
 
AT3G47710.1     L S K E V D D L S E R L S Q L L E S T D S A Q A A L I R S L L M Q
gm010049_Glyma0    L H R E V D D L S E R L S E L L A T T D T A Q A A I I R N L L M Q
 
0