fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G47870.1 FQNVHRLFGVRSIVK at 69/328 in AT3G47870.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt023892 FQNAHKLFGVRKILR in 44/269 AT3G47870.1 1st_1st 0.346224677 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G47870.1     MSNTKHIHKGLQERLLDLLLIALIVYMTLKGGTSGACAACKYQRRRCAADCPLAPYFPAE
pt023892_POPTR_ --------------------------MTLKGGTSQACASCKYQRRKCSSECPLAPYFPSE
                                          ******** ***:******:*:::********:*

AT3G47870.1     QPKLFQNVHRLFGVRSIVKILEKLDETQKPEAMKSIIFQSYVRDRSPVHGCLGVTQQLQY
pt023892_POPTR_ QPKMFQNAHKLFGVRKILRILENLDYLQKEEAMRSIIYQSNIRDRFPVHGCLGIIYQLHF
                ***:***.*:*****.*::***:**  ** ***:***:** :*** *******:  **::

AT3G47870.1     MIWFAEEELKAVNSQLQLYRSQPQNGQNQNQNHNHNQMIHELGSDHNKQQEDVTSQQLDL
pt023892_POPTR_ QIRQAEEELRAVYAHLEMYR-----------QHHHHQIA--------ALTEDVPS-QLEL
                 *  *****:** ::*::**           :*:*:*:            ***.* **:*

AT3G47870.1     GMGLNVNNNQSNVVTPFFSSLLPVSETQQPQMSYTYSCSEVNNNGYSPPAYNTDSGKEIL
pt023892_POPTR_ GMAL-----------------------PQPCLAQQYSYSISSNIGYS-------SG--YL
                **.*                        ** ::  ** *  .* ***       **   *

AT3G47870.1     TNNNNV----WGDQNRFLYNNNNGGGYSNQNESCHEMKSNGVMAIQSQLVNLQMVSNHQR
pt023892_POPTR_ DSNDNVGNQLW-SQHPYATNSN----------------TNYTPIIQSQLDASQPLSTQQE
                 .*:**    * .*: :  *.*                :* .  *****   * :*.:*.

AT3G47870.1     VEEEEADHEYDELHQFLDIIDDRQSFGDSKEA----------------------------
pt023892_POPTR_ IVQ-----DYDEMHSFFDTIDDRQSYIETKEPYESSSEESLKDTTQSMEHVAENELKSAA
                : :     :***:*.*:* ******: ::**.                            

AT3G47870.1     ---------
pt023892_POPTR_ ACFSLTSVN
BoxShade v3.31 C (beta, 970507) Output
AT3G47870.1     M S N T K H I H K G L Q E R L L D L L L I A L I V Y M T L K G G T S G A C A A C K Y Q R R R C A A D C P L A P Y F P A E
pt023892_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - M T L K G G T S Q A C A S C K Y Q R R K C S S E C P L A P Y F P S E
 
AT3G47870.1     Q P K L F Q N V H R L F G V R S I V K I L E K L D E T Q K P E A M K S I I F Q S Y V R D R S P V H G C L G V T Q Q L Q Y
pt023892_POPTR_    Q P K M F Q N A H K L F G V R K I L R I L E N L D Y L Q K E E A M R S I I Y Q S N I R D R F P V H G C L G I I Y Q L H F
 
AT3G47870.1     M I W F A E E E L K A V N S Q L Q L Y R S Q P Q N G Q N Q N Q N H N H N Q M I H E L G S D H N K Q Q E D V T S Q Q L D L
pt023892_POPTR_    Q I R Q A E E E L R A V Y A H L E M Y R - - - - - - - - - - - Q H H H H Q I A - - - - - - - - A L T E D V P S - Q L E L
 
AT3G47870.1     G M G L N V N N N Q S N V V T P F F S S L L P V S E T Q Q P Q M S Y T Y S C S E V N N N G Y S P P A Y N T D S G K E I L
pt023892_POPTR_    G M A L - - - - - - - - - - - - - - - - - - - - - - - P Q P C L A Q Q Y S Y S I S S N I G Y S - - - - - - - S G - - Y L
 
AT3G47870.1     T N N N N V - - - - W G D Q N R F L Y N N N N G G G Y S N Q N E S C H E M K S N G V M A I Q S Q L V N L Q M V S N H Q R
pt023892_POPTR_    D S N D N V G N Q L W - S Q H P Y A T N S N - - - - - - - - - - - - - - - - T N Y T P I I Q S Q L D A S Q P L S T Q Q E
 
AT3G47870.1     V E E E E A D H E Y D E L H Q F L D I I D D R Q S F G D S K E A - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt023892_POPTR_    I V Q - - - - - D Y D E M H S F F D T I D D R Q S Y I E T K E P Y E S S S E E S L K D T T Q S M E H V A E N E L K S A A
 
AT3G47870.1     - - - - - - - - -
pt023892_POPTR_    A C F S L T S V N
 
0