fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G47870.1 FQNVHRLFGVRSIVK at 69/328 in AT3G47870.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb017751 FRSAHRLFGVSNILK in 50/282 AT3G47870.1 1st_1st 0.202578268 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G47870.1     MSNTKHIHKGLQERLLDLLLIALIVYMTLKGGTSG------ACAACKYQRRRCAADCPLA
Sb017751_Sorbi1 --------------------------MEAAGGGGGPPPAVTACAACKYQRRRCVADCPLA
                                          *   ** .*      ************.******

AT3G47870.1     PYFPAEQPKLFQNVHRLFGVRSIVKILEKL--DETQKPEAMKSIIFQSYVRDRSPVHGCL
Sb017751_Sorbi1 PYFPHDRSRVFRSAHRLFGVSNILKTLERAGPDPDRRHEAMQCVVYESQAWDLYPSAGCV
                **** ::.::*:..****** .*:* **:   *  :: ***:.::::* . *  *  **:

AT3G47870.1     GVTQQLQYMIWFAEEELKAVNSQLQLYRSQPQNGQNQNQNHNHNQMIHELGSDHNKQQED
Sb017751_Sorbi1 PIIHGLQQRIHQVENELRRVRAHLQAYQ-QP-------------------------QPRD
                 : : **  *  .*:**: *.::** *: **                         * .*

AT3G47870.1     VTSQQLDLGMGLNVNNNQSNVVTPFFSSLLPVSETQQP---QMSYTYSCSEVNNNGYSPP
Sb017751_Sorbi1 IVD---DAAAGVR------------YSSMPPSS----PPPFQLQWTAAAMGEDDEGIAAA
                :..   * . *:.            :**: * *    *   *:.:* :.   :::* :..

AT3G47870.1     AYNT--DSGKEILTNNNNVWGDQNRFLYNNN---------------NGGGYSNQ---NES
Sb017751_Sorbi1 AAAAARDDERQMMINDNAVTSDDD----GNNMPPPPPPHTTLRWTLQPPQYEHPFFVNET
                *  :  *. :::: *:* * .*::    .**               :   *.:    **:

AT3G47870.1     C-------HEMKSNGVMAIQSQLVNLQMVSNHQRVEEEEADHEYDELHQFLDIIDDRQSF
Sb017751_Sorbi1 SMLPQFQFHYQHHQPVVAVSTQLPELQ-------------EDDMTMVNYFAD--DDGINN
                .       *  : : *:*:.:** :**             :.:   :: * *  **  . 

AT3G47870.1     GDSKEA------
Sb017751_Sorbi1 GENDEMPRRQSR
                *:..*
BoxShade v3.31 C (beta, 970507) Output
AT3G47870.1     M S N T K H I H K G L Q E R L L D L L L I A L I V Y M T L K G G T S G - - - - - - A C A A C K Y Q R R R C A A D C P L A
Sb017751_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - M E A A G G G G G P P P A V T A C A A C K Y Q R R R C V A D C P L A
 
AT3G47870.1     P Y F P A E Q P K L F Q N V H R L F G V R S I V K I L E K L - - D E T Q K P E A M K S I I F Q S Y V R D R S P V H G C L
Sb017751_Sorbi1    P Y F P H D R S R V F R S A H R L F G V S N I L K T L E R A G P D P D R R H E A M Q C V V Y E S Q A W D L Y P S A G C V
 
AT3G47870.1     G V T Q Q L Q Y M I W F A E E E L K A V N S Q L Q L Y R S Q P Q N G Q N Q N Q N H N H N Q M I H E L G S D H N K Q Q E D
Sb017751_Sorbi1    P I I H G L Q Q R I H Q V E N E L R R V R A H L Q A Y Q - Q P - - - - - - - - - - - - - - - - - - - - - - - - - Q P R D
 
AT3G47870.1     V T S Q Q L D L G M G L N V N N N Q S N V V T P F F S S L L P V S E T Q Q P - - - Q M S Y T Y S C S E V N N N G Y S P P
Sb017751_Sorbi1    I V D - - - D A A A G V R - - - - - - - - - - - - Y S S M P P S S - - - - P P P F Q L Q W T A A A M G E D D E G I A A A
 
AT3G47870.1     A Y N T - - D S G K E I L T N N N N V W G D Q N R F L Y N N N - - - - - - - - - - - - - - - N G G G Y S N Q - - - N E S
Sb017751_Sorbi1    A A A A A R D D E R Q M M I N D N A V T S D D D - - - - G N N M P P P P P P H T T L R W T L Q P P Q Y E H P F F V N E T
 
AT3G47870.1     C - - - - - - - H E M K S N G V M A I Q S Q L V N L Q M V S N H Q R V E E E E A D H E Y D E L H Q F L D I I D D R Q S F
Sb017751_Sorbi1    S M L P Q F Q F H Y Q H H Q P V V A V S T Q L P E L Q - - - - - - - - - - - - - E D D M T M V N Y F A D - - D D G I N N
 
AT3G47870.1     G D S K E A - - - - - -
Sb017751_Sorbi1    G E N D E M P R R Q S R
 
1