Input
| Putative repression domain
|
|
AT3G48160.2 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt023953 |
not found in 385aa |
AT3G48160.2 |
not_1st |
0.481428571 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT3G48160.2 MSDLSPERFKLAVTSPSSIPESSSALQLHHSYSRKQKSLGLLCTNFLALYNREGIEMVGL
pt023953_POPTR_ ----------MALSYSDIIDPSSR----HHTYSRKQKSLGLLCTNFLTLYDRDDIDVIGL
:*:: .. * ** **:****************:**:*:.*:::**
AT3G48160.2 DDAASKLGVERRRIYDIVNVLESVGVLTRRAKNQYTWKGFSAIPGALKELQEEGVKDTFH
pt023953_POPTR_ DDAASKLGVERRRIYDIVNVLESVGVLARKAKNKYLWKGFAAVPKALQELKEEGLRDNVN
***************************:*:***:* ****:*:* **:**:***::*..:
AT3G48160.2 RF--YVNENVK-GSDDEDDDEES-SQPHSSSQTDSSKPGSLPQSSDPSKIDNRREKSLGL
pt023953_POPTR_ TIDKQSNNSVKVADDDEDEDDDSDSNPNTGSQNENS---GIIKSTAASRFDHRREKSLGL
: *:.** ..****:*::* *:*::.**.:.* .: :*: .*::*:********
AT3G48160.2 LTQNFIKLFICSEAIRIISLDDAAKLLLGDAHNTSIMRTKVRRLYDIANVLSSMNLIEKT
pt023953_POPTR_ LTQNFVKLFVCFNA-NLISLDESAKLLLGDGHKSSIMRTKVRRLYDIANVLSSLKLIEKT
*****:***:* :* .:****::*******.*::*******************::*****
AT3G48160.2 HTLDSRKPAFKWLGYNGEPTFTLSSDLLQLESRKRAFGTDITNVNVKRSKSSSSSQENAT
pt023953_POPTR_ HTADTRKPAFRWLGLRGKSENGSGDPLAPFESRKRTFGADVTNICSKRNKTDSSVDGDKS
** *:*****:*** .*:. .. * :*****:**:*:**: **.*:.** : : :
AT3G48160.2 ERRLKMKKHSTPES----SYNKSFDVHESRHGSRGGYHFGPFAPGTGTYPTAGLEDNSRR
pt023953_POPTR_ -KNLKMQKQIKDENIVTVVQRGNFD-QDSQQNS-GSFQFGPFAP-VSIARVGNSEEKVTQ
:.***:*: . *. . .** ::*::.* *.::****** .. ... *:: :
AT3G48160.2 AFDVENLDSDYRPSYQNQVLKDLFSHYMDAWKTWFSEVTQENPLPNTSQHR
pt023953_POPTR_ IYDWEGLSSTFRPQYHNQALRDLFFHYTEAWKSWYTEVAGKKPLHIS----
:* *.*.* :**.*:**.*:*** ** :***:*::**: ::** :
BoxShade v3.31 C (beta, 970507) Output
AT3G48160.2 |
M |
S |
D |
L |
S |
P |
E |
R |
F |
K |
L |
A |
V |
T |
S |
P |
S |
S |
I |
P |
E |
S |
S |
S |
A |
L |
Q |
L |
H |
H |
S |
Y |
S |
R |
K |
Q |
K |
S |
L |
G |
L |
L |
C |
T |
N |
F |
L |
A |
L |
Y |
N |
R |
E |
G |
I |
E |
M |
V |
G |
L |
pt023953_POPTR_ |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
A |
L |
S |
Y |
S |
D |
I |
I |
D |
P |
S |
S |
R |
- |
- |
- |
- |
H |
H |
T |
Y |
S |
R |
K |
Q |
K |
S |
L |
G |
L |
L |
C |
T |
N |
F |
L |
T |
L |
Y |
D |
R |
D |
D |
I |
D |
V |
I |
G |
L |
|
AT3G48160.2 |
D |
D |
A |
A |
S |
K |
L |
G |
V |
E |
R |
R |
R |
I |
Y |
D |
I |
V |
N |
V |
L |
E |
S |
V |
G |
V |
L |
T |
R |
R |
A |
K |
N |
Q |
Y |
T |
W |
K |
G |
F |
S |
A |
I |
P |
G |
A |
L |
K |
E |
L |
Q |
E |
E |
G |
V |
K |
D |
T |
F |
H |
pt023953_POPTR_ |
D |
D |
A |
A |
S |
K |
L |
G |
V |
E |
R |
R |
R |
I |
Y |
D |
I |
V |
N |
V |
L |
E |
S |
V |
G |
V |
L |
A |
R |
K |
A |
K |
N |
K |
Y |
L |
W |
K |
G |
F |
A |
A |
V |
P |
K |
A |
L |
Q |
E |
L |
K |
E |
E |
G |
L |
R |
D |
N |
V |
N |
|
AT3G48160.2 |
R |
F |
- |
- |
Y |
V |
N |
E |
N |
V |
K |
- |
G |
S |
D |
D |
E |
D |
D |
D |
E |
E |
S |
- |
S |
Q |
P |
H |
S |
S |
S |
Q |
T |
D |
S |
S |
K |
P |
G |
S |
L |
P |
Q |
S |
S |
D |
P |
S |
K |
I |
D |
N |
R |
R |
E |
K |
S |
L |
G |
L |
pt023953_POPTR_ |
T |
I |
D |
K |
Q |
S |
N |
N |
S |
V |
K |
V |
A |
D |
D |
D |
E |
D |
E |
D |
D |
D |
S |
D |
S |
N |
P |
N |
T |
G |
S |
Q |
N |
E |
N |
S |
- |
- |
- |
G |
I |
I |
K |
S |
T |
A |
A |
S |
R |
F |
D |
H |
R |
R |
E |
K |
S |
L |
G |
L |
|
AT3G48160.2 |
L |
T |
Q |
N |
F |
I |
K |
L |
F |
I |
C |
S |
E |
A |
I |
R |
I |
I |
S |
L |
D |
D |
A |
A |
K |
L |
L |
L |
G |
D |
A |
H |
N |
T |
S |
I |
M |
R |
T |
K |
V |
R |
R |
L |
Y |
D |
I |
A |
N |
V |
L |
S |
S |
M |
N |
L |
I |
E |
K |
T |
pt023953_POPTR_ |
L |
T |
Q |
N |
F |
V |
K |
L |
F |
V |
C |
F |
N |
A |
- |
N |
L |
I |
S |
L |
D |
E |
S |
A |
K |
L |
L |
L |
G |
D |
G |
H |
K |
S |
S |
I |
M |
R |
T |
K |
V |
R |
R |
L |
Y |
D |
I |
A |
N |
V |
L |
S |
S |
L |
K |
L |
I |
E |
K |
T |
|
AT3G48160.2 |
H |
T |
L |
D |
S |
R |
K |
P |
A |
F |
K |
W |
L |
G |
Y |
N |
G |
E |
P |
T |
F |
T |
L |
S |
S |
D |
L |
L |
Q |
L |
E |
S |
R |
K |
R |
A |
F |
G |
T |
D |
I |
T |
N |
V |
N |
V |
K |
R |
S |
K |
S |
S |
S |
S |
S |
Q |
E |
N |
A |
T |
pt023953_POPTR_ |
H |
T |
A |
D |
T |
R |
K |
P |
A |
F |
R |
W |
L |
G |
L |
R |
G |
K |
S |
E |
N |
G |
S |
G |
D |
P |
L |
A |
P |
F |
E |
S |
R |
K |
R |
T |
F |
G |
A |
D |
V |
T |
N |
I |
C |
S |
K |
R |
N |
K |
T |
D |
S |
S |
V |
D |
G |
D |
K |
S |
|
AT3G48160.2 |
E |
R |
R |
L |
K |
M |
K |
K |
H |
S |
T |
P |
E |
S |
- |
- |
- |
- |
S |
Y |
N |
K |
S |
F |
D |
V |
H |
E |
S |
R |
H |
G |
S |
R |
G |
G |
Y |
H |
F |
G |
P |
F |
A |
P |
G |
T |
G |
T |
Y |
P |
T |
A |
G |
L |
E |
D |
N |
S |
R |
R |
pt023953_POPTR_ |
- |
K |
N |
L |
K |
M |
Q |
K |
Q |
I |
K |
D |
E |
N |
I |
V |
T |
V |
V |
Q |
R |
G |
N |
F |
D |
- |
Q |
D |
S |
Q |
Q |
N |
S |
- |
G |
S |
F |
Q |
F |
G |
P |
F |
A |
P |
- |
V |
S |
I |
A |
R |
V |
G |
N |
S |
E |
E |
K |
V |
T |
Q |
|
AT3G48160.2 |
A |
F |
D |
V |
E |
N |
L |
D |
S |
D |
Y |
R |
P |
S |
Y |
Q |
N |
Q |
V |
L |
K |
D |
L |
F |
S |
H |
Y |
M |
D |
A |
W |
K |
T |
W |
F |
S |
E |
V |
T |
Q |
E |
N |
P |
L |
P |
N |
T |
S |
Q |
H |
R |
pt023953_POPTR_ |
I |
Y |
D |
W |
E |
G |
L |
S |
S |
T |
F |
R |
P |
Q |
Y |
H |
N |
Q |
A |
L |
R |
D |
L |
F |
F |
H |
Y |
T |
E |
A |
W |
K |
S |
W |
Y |
T |
E |
V |
A |
G |
K |
K |
P |
L |
H |
I |
S |
- |
- |
- |
- |
|
|