fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G48440.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt023862 not found in 477aa AT3G48440.1 1st_1st 0.432548179 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G48440.1     ----------MVNSEEIADGFEPKPVS-RSYSGDSSHDRS-LSDLNHAAEDLSDKLKNVG
pt023862_POPTR_ MDQQIESPIPIIHKEIPQLGFQSFSSSPRFPSTPSDPDQTALDDDNHLHQELQNQLD---
                          :::.*    **:. . * *  *  *. *:: *.* **  ::*.::*.   

AT3G48440.1     LNEVTKEQSEKMMSVSESNGGLDSNAVVTINQEEEEEEE---------------DRDGYG
pt023862_POPTR_ LKE----------------GSLNSN---DSHEEEEEEEEEFKSDKKIEFFYESIEKVGDG
                *:*                *.*:**     ::*******               :: * *

AT3G48440.1     YGDGWSENESEN-----------VYPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARK--
pt023862_POPTR_ GDDLENKNERSNDIENNNSSGYHQYPVRPEAEDCAFYMKTGTCKFGANCKFNHPLRRKNQ
                 .*  .:** .*            ***** ****:***:**:****:.******* **  

AT3G48440.1     FQIARDNKVREKEDDGGKLGLIDCKYYFRTGGCKYGETCRFNH-----TIPKSGLASAP-
pt023862_POPTR_ VQLTVKEKTKEREEATEKPSLIECKYYLKTGGCKYGTACRFNHSRAKYSVPPVKIPMSPA
                .*:: .:*.:*:*:   * .**:****::******* :*****     ::*   :. :* 

AT3G48440.1     -ELNFLGLPLRPGEVECPYYMRNGSCKYGAECKFNHPDPTTIGGTDSPSFRGNNGVSIGT
pt023862_POPTR_ LELNFLGLPIRLGEKECEYFMRNGSCKFGANCKYNHPDPTAVGGSDHPSTFLNGGSA---
                 ********:* ** ** *:*******:**:**:******::**:* **   *.* :   

AT3G48440.1     FSPKATFQASSTSWSSPRHVNGTSPFIPVMLSQTHGVTSQNPEWNGYQASVYSSERGVFS
pt023862_POPTR_ -SLPVPSSSSVGSWSSPRALNDPTSFVPIMFSPNQGVPPQSPDWNGYQAPLYPPERSL-H
                 *  .. .:*  ****** :*..:.*:*:*:* .:**..*.*:******.:*..**.:  

AT3G48440.1     PSTTYLMNNSSAETSMLLSQYRHQMPAEEFPERPDQPECSYYMKTGDCKFKFNCKYHHPK
pt023862_POPTR_ PPLSYALINIATESNVYAPQ-QQQIVVDEFPERPGQPQCSFYMKFGDCKFKSNCKYHHPK
                *. :* : * ::*:.:  .* ::*: .:******.**:**:*** ****** ********

AT3G48440.1     NRLPKLPPYALNDKGLPLRPDQNICTYYSRYGICKFGPACRFDHSVQPPYSTESS-----
pt023862_POPTR_ NRISKSPPLTLSDKGLPLRPDQNICSHYSRYGICKFGPSCKFDHSIQPASSIGSSDDQNT
                **:.* ** :*.*************::***********:*:****:**. *  **     

AT3G48440.1     ----QAIVEPPQVSANGNESDGWN-
pt023862_POPTR_ AFGNSVTQEAARMAESGNGSDTAVE
                    ..  *..::: .** **
BoxShade v3.31 C (beta, 970507) Output
AT3G48440.1     - - - - - - - - - - M V N S E E I A D G F E P K P V S - R S Y S G D S S H D R S - L S D L N H A A E D L S D K L K N V G
pt023862_POPTR_    M D Q Q I E S P I P I I H K E I P Q L G F Q S F S S S P R F P S T P S D P D Q T A L D D D N H L H Q E L Q N Q L D - - -
 
AT3G48440.1     L N E V T K E Q S E K M M S V S E S N G G L D S N A V V T I N Q E E E E E E E - - - - - - - - - - - - - - - D R D G Y G
pt023862_POPTR_    L K E - - - - - - - - - - - - - - - - G S L N S N - - - D S H E E E E E E E E E F K S D K K I E F F Y E S I E K V G D G
 
AT3G48440.1     Y G D G W S E N E S E N - - - - - - - - - - - V Y P V R P G A E D C S F Y M R T G S C K F G S S C K F N H P L A R K - -
pt023862_POPTR_    G D D L E N K N E R S N D I E N N N S S G Y H Q Y P V R P E A E D C A F Y M K T G T C K F G A N C K F N H P L R R K N Q
 
AT3G48440.1     F Q I A R D N K V R E K E D D G G K L G L I D C K Y Y F R T G G C K Y G E T C R F N H - - - - - T I P K S G L A S A P -
pt023862_POPTR_    V Q L T V K E K T K E R E E A T E K P S L I E C K Y Y L K T G G C K Y G T A C R F N H S R A K Y S V P P V K I P M S P A
 
AT3G48440.1     - E L N F L G L P L R P G E V E C P Y Y M R N G S C K Y G A E C K F N H P D P T T I G G T D S P S F R G N N G V S I G T
pt023862_POPTR_    L E L N F L G L P I R L G E K E C E Y F M R N G S C K F G A N C K Y N H P D P T A V G G S D H P S T F L N G G S A - - -
 
AT3G48440.1     F S P K A T F Q A S S T S W S S P R H V N G T S P F I P V M L S Q T H G V T S Q N P E W N G Y Q A S V Y S S E R G V F S
pt023862_POPTR_    - S L P V P S S S S V G S W S S P R A L N D P T S F V P I M F S P N Q G V P P Q S P D W N G Y Q A P L Y P P E R S L - H
 
AT3G48440.1     P S T T Y L M N N S S A E T S M L L S Q Y R H Q M P A E E F P E R P D Q P E C S Y Y M K T G D C K F K F N C K Y H H P K
pt023862_POPTR_    P P L S Y A L I N I A T E S N V Y A P Q - Q Q Q I V V D E F P E R P G Q P Q C S F Y M K F G D C K F K S N C K Y H H P K
 
AT3G48440.1     N R L P K L P P Y A L N D K G L P L R P D Q N I C T Y Y S R Y G I C K F G P A C R F D H S V Q P P Y S T E S S - - - - -
pt023862_POPTR_    N R I S K S P P L T L S D K G L P L R P D Q N I C S H Y S R Y G I C K F G P S C K F D H S I Q P A S S I G S S D D Q N T
 
AT3G48440.1     - - - - Q A I V E P P Q V S A N G N E S D G W N -
pt023862_POPTR_    A F G N S V T Q E A A R M A E S G N G S D T A V E
 
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