fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G48590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm015491 not found in 229aa AT3G48590.1 1st_1st 0.822525597 Ia
Pt027792 not found in 248aa AT3G48590.1 1st_1st 0.866894197 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G48590.1     MD--TNNQQPPPSA------AGIPPPPPGTTISAAGGGAS--------YHHLLQQQQQQL
gm015491_Glyma0 ME--TNNQQQQQQG----AQAQSGPYPV----AGAGGSAGAGAGAPPPFQHLLQQQQQQL
pt027792_POPTR_ MDNTTTNHQPQPTAYPTQSITTTPPLPP------AGGAPSS-----TPFHHLLQQQQQQL
                *:  *.*:*    .      :   * *       ***...        ::**********

AT3G48590.1     QLFWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELT
gm015491_Glyma0 QMFWSYQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELT
pt027792_POPTR_ QMFWSYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELT
                *:**:*******:***********************************************

AT3G48590.1     IRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAAVLGGGMVVAPTAS
gm015491_Glyma0 IRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDDAA------LVGATAS
pt027792_POPTR_ IRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKEEAAGLGG--IVGATAS
                *******************************************::**      :*..***

AT3G48590.1     GVPYYYPPMGQPAGP-GGMMIGRPAMDP-NGVYVQPPSQAWQSVWQTSTGTGDDVSYGSG
gm015491_Glyma0 GVPYYYPPIGQPA----GMMIGRPAVDPATGVYVQPPSQAWQSVWQSA---AEDASYGTG
pt027792_POPTR_ GVPYYYPPMGQPAAATGGMMIGRPAMDPATGVYVQPPSQAWQSVWQTA--ATEDGSYGSG
                ********:****    ********:** .****************::    :* ***:*

AT3G48590.1     GSS-GQGNLDGQG----------
gm015491_Glyma0 GAG-AQRSLDGQS----------
pt027792_POPTR_ GASGGQGNLDGQDYSKWTLPQLK
                *:. .* .****.
BoxShade v3.31 C (beta, 970507) Output
AT3G48590.1     M D - - T N N Q Q P P P S A - - - - - - A G I P P P P P G T T I S A A G G G A S - - - - - - - - Y H H L L Q Q Q Q Q Q L
gm015491_Glyma0    M E - - T N N Q Q Q Q Q Q G - - - - A Q A Q S G P Y P V - - - - A G A G G S A G A G A G A P P P F Q H L L Q Q Q Q Q Q L
pt027792_POPTR_    M D N T T T N H Q P Q P T A Y P T Q S I T T T P P L P P - - - - - - A G G A P S S - - - - - T P F H H L L Q Q Q Q Q Q L
 
AT3G48590.1     Q L F W T Y Q R Q E I E Q V N D F K N H Q L P L A R I K K I M K A D E D V R M I S A E A P I L F A K A C E L F I L E L T
gm015491_Glyma0    Q M F W S Y Q R Q E I E H V N D F K N H Q L P L A R I K K I M K A D E D V R M I S A E A P I L F A K A C E L F I L E L T
pt027792_POPTR_    Q M F W S Y Q R Q E I E Q V N D F K N H Q L P L A R I K K I M K A D E D V R M I S A E A P I L F A K A C E L F I L E L T
 
AT3G48590.1     I R S W L H A E E N K R R T L Q K N D I A A A I T R T D I F D F L V D I V P R D E I K D E A A V L G G G M V V A P T A S
gm015491_Glyma0    I R S W L H A E E N K R R T L Q K N D I A A A I T R T D I F D F L V D I V P R D E I K D D A A - - - - - - L V G A T A S
pt027792_POPTR_    I R S W L H A E E N K R R T L Q K N D I A A A I T R T D I F D F L V D I V P R D E I K E E A A G L G G - - I V G A T A S
 
AT3G48590.1     G V P Y Y Y P P M G Q P A G P - G G M M I G R P A M D P - N G V Y V Q P P S Q A W Q S V W Q T S T G T G D D V S Y G S G
gm015491_Glyma0    G V P Y Y Y P P I G Q P A - - - - G M M I G R P A V D P A T G V Y V Q P P S Q A W Q S V W Q S A - - - A E D A S Y G T G
pt027792_POPTR_    G V P Y Y Y P P M G Q P A A A T G G M M I G R P A M D P A T G V Y V Q P P S Q A W Q S V W Q T A - - A T E D G S Y G S G
 
AT3G48590.1     G S S - G Q G N L D G Q G - - - - - - - - - -
gm015491_Glyma0    G A G - A Q R S L D G Q S - - - - - - - - - -
pt027792_POPTR_    G A S G G Q G N L D G Q D Y S K W T L P Q L K
 
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