fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G48590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt022933 not found in 237aa AT3G48590.1 not_1st 0.863481228 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G48590.1     MD-----TNNQQ-----PPPSAAGIPPPPPGTTISAAGGGASYHHLLQQQQQQLQLFWTY
pt022933_POPTR_ MDNTNTNTNHQPQSTAYPPHSTTTTPPPPP----PGAPSSAPFHHLLQQQQQQLQMFWSY
                **     **:*      ** *::  *****    ..* ..*.:************:**:*

AT3G48590.1     QRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLH
pt022933_POPTR_ QRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLH
                ************************************************************

AT3G48590.1     AEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAAVLGGGMVVAPTASGVPYYY
pt022933_POPTR_ AEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKEEAAGLGG--IVGATASGVPYYY
                *************************************:*** ***  :*..*********

AT3G48590.1     PPMGQP---AGPGGMMIGRPAMDP-NGVYVQPPSQAWQSVWQTSTGTGDDVSYGSGGSSG
pt022933_POPTR_ PPMGQPAAAAAAGGMMIGRPAVDPATGVYVQPPSQAWQSVWQTA--AAEDGSYGSGGASG
                ******   *..*********:** .*****************:  :.:* ******:**

AT3G48590.1     QGNLDGQG--
pt022933_POPTR_ -----GQGET
                     ***
BoxShade v3.31 C (beta, 970507) Output
AT3G48590.1     M D - - - - - T N N Q Q - - - - - P P P S A A G I P P P P P G T T I S A A G G G A S Y H H L L Q Q Q Q Q Q L Q L F W T Y
pt022933_POPTR_    M D N T N T N T N H Q P Q S T A Y P P H S T T T T P P P P P - - - - P G A P S S A P F H H L L Q Q Q Q Q Q L Q M F W S Y
 
AT3G48590.1     Q R Q E I E Q V N D F K N H Q L P L A R I K K I M K A D E D V R M I S A E A P I L F A K A C E L F I L E L T I R S W L H
pt022933_POPTR_    Q R Q E I E Q V N D F K N H Q L P L A R I K K I M K A D E D V R M I S A E A P I L F A K A C E L F I L E L T I R S W L H
 
AT3G48590.1     A E E N K R R T L Q K N D I A A A I T R T D I F D F L V D I V P R D E I K D E A A V L G G G M V V A P T A S G V P Y Y Y
pt022933_POPTR_    A E E N K R R T L Q K N D I A A A I T R T D I F D F L V D I V P R D E I K E E A A G L G G - - I V G A T A S G V P Y Y Y
 
AT3G48590.1     P P M G Q P - - - A G P G G M M I G R P A M D P - N G V Y V Q P P S Q A W Q S V W Q T S T G T G D D V S Y G S G G S S G
pt022933_POPTR_    P P M G Q P A A A A A A G G M M I G R P A V D P A T G V Y V Q P P S Q A W Q S V W Q T A - - A A E D G S Y G S G G A S G
 
AT3G48590.1     Q G N L D G Q G - -
pt022933_POPTR_    - - - - - G Q G E T
 
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