fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G48590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt027792 not found in 248aa AT3G48590.1 1st_1st 0.866894197 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G48590.1     MD--TNNQQPPPSA------AGIPPPPPGTTISAAGGGAS---YHHLLQQQQQQLQLFWT
pt027792_POPTR_ MDNTTTNHQPQPTAYPTQSITTTPPLPP------AGGAPSSTPFHHLLQQQQQQLQMFWS
                **  *.*:** *:*      :  ** **      ***..*   :************:**:

AT3G48590.1     YQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
pt027792_POPTR_ YQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWL
                ************************************************************

AT3G48590.1     HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAAVLGGGMVVAPTASGVPYY
pt027792_POPTR_ HAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKEEAAGLGG--IVGATASGVPYY
                **************************************:*** ***  :*..********

AT3G48590.1     YPPMGQPAGP-GGMMIGRPAMDP-NGVYVQPPSQAWQSVWQTSTGTGDDVSYGSGGSS-G
pt027792_POPTR_ YPPMGQPAAATGGMMIGRPAMDPATGVYVQPPSQAWQSVWQTA--ATEDGSYGSGGASGG
                ********.. ************ .*****************:  : :* ******:* *

AT3G48590.1     QGNLDGQG----------
pt027792_POPTR_ QGNLDGQDYSKWTLPQLK
                *******.
BoxShade v3.31 C (beta, 970507) Output
AT3G48590.1     M D - - T N N Q Q P P P S A - - - - - - A G I P P P P P G T T I S A A G G G A S - - - Y H H L L Q Q Q Q Q Q L Q L F W T
pt027792_POPTR_    M D N T T T N H Q P Q P T A Y P T Q S I T T T P P L P P - - - - - - A G G A P S S T P F H H L L Q Q Q Q Q Q L Q M F W S
 
AT3G48590.1     Y Q R Q E I E Q V N D F K N H Q L P L A R I K K I M K A D E D V R M I S A E A P I L F A K A C E L F I L E L T I R S W L
pt027792_POPTR_    Y Q R Q E I E Q V N D F K N H Q L P L A R I K K I M K A D E D V R M I S A E A P I L F A K A C E L F I L E L T I R S W L
 
AT3G48590.1     H A E E N K R R T L Q K N D I A A A I T R T D I F D F L V D I V P R D E I K D E A A V L G G G M V V A P T A S G V P Y Y
pt027792_POPTR_    H A E E N K R R T L Q K N D I A A A I T R T D I F D F L V D I V P R D E I K E E A A G L G G - - I V G A T A S G V P Y Y
 
AT3G48590.1     Y P P M G Q P A G P - G G M M I G R P A M D P - N G V Y V Q P P S Q A W Q S V W Q T S T G T G D D V S Y G S G G S S - G
pt027792_POPTR_    Y P P M G Q P A A A T G G M M I G R P A M D P A T G V Y V Q P P S Q A W Q S V W Q T A - - A T E D G S Y G S G G A S G G
 
AT3G48590.1     Q G N L D G Q G - - - - - - - - - -
pt027792_POPTR_    Q G N L D G Q D Y S K W T L P Q L K
 
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