fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G48590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os012186 not found in 246aa AT5G63470.2 1st_not 0.645051194 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G48590.1     MDTNNQQPP----PSAAGIPPPPPGTTISAAGG--GASYHHLLQQQQQQLQLFWTYQRQE
Os012186_Os03t0 MD--NQQLPYAGQPAAAGAGAPVPG--VPGAGGPPAVPHHHLLQQQQAQLQAFWAYQRQE
                **  *** *    *:***  .* **  :..***  ...:******** *** **:*****

AT3G48590.1     IEQ--VNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAE
Os012186_Os03t0 AERASASDFKNHQLPLARIKKIMKADEDVRMISAEAPVLFAKACELFILELTIRSWLHAE
                 *:  ..******************************:**********************

AT3G48590.1     ENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE-AAVLG-------GGMVVAPTAS
Os012186_Os03t0 ENKRRTLQRNDVAAAIARTDVFDFLVDIVPREEAKEEPGSALGFAAGGPAGAVGAAGPAA
                ********:**:****:***:**********:* *:* .:.**       *.: .* .*:

AT3G48590.1     GVPYYYPPMGQPAGPGGMMIG--RPAMDPNGVYVQPPSQAWQSVWQTSTGTGDDVSYGSG
Os012186_Os03t0 GLPYYYPPMGQPA-P--MMPAWHVPAWDP----------AWQQ------GAAPDVDQGAA
                *:*********** *  ** .   ** **          ***.      *:. **. *:.

AT3G48590.1     GS---SGQGNLDGQG--------------
Os012186_Os03t0 GSFSEEGQQGFAGHGGAAASFPPAPPSSE
                **   .** .: *:*
BoxShade v3.31 C (beta, 970507) Output
AT3G48590.1     M D T N N Q Q P P - - - - P S A A G I P P P P P G T T I S A A G G - - G A S Y H H L L Q Q Q Q Q Q L Q L F W T Y Q R Q E
Os012186_Os03t0    M D - - N Q Q L P Y A G Q P A A A G A G A P V P G - - V P G A G G P P A V P H H H L L Q Q Q Q A Q L Q A F W A Y Q R Q E
 
AT3G48590.1     I E Q - - V N D F K N H Q L P L A R I K K I M K A D E D V R M I S A E A P I L F A K A C E L F I L E L T I R S W L H A E
Os012186_Os03t0    A E R A S A S D F K N H Q L P L A R I K K I M K A D E D V R M I S A E A P V L F A K A C E L F I L E L T I R S W L H A E
 
AT3G48590.1     E N K R R T L Q K N D I A A A I T R T D I F D F L V D I V P R D E I K D E - A A V L G - - - - - - - G G M V V A P T A S
Os012186_Os03t0    E N K R R T L Q R N D V A A A I A R T D V F D F L V D I V P R E E A K E E P G S A L G F A A G G P A G A V G A A G P A A
 
AT3G48590.1     G V P Y Y Y P P M G Q P A G P G G M M I G - - R P A M D P N G V Y V Q P P S Q A W Q S V W Q T S T G T G D D V S Y G S G
Os012186_Os03t0    G L P Y Y Y P P M G Q P A - P - - M M P A W H V P A W D P - - - - - - - - - - A W Q Q - - - - - - G A A P D V D Q G A A
 
AT3G48590.1     G S - - - S G Q G N L D G Q G - - - - - - - - - - - - - -
Os012186_Os03t0    G S F S E E G Q Q G F A G H G G A A A S F P P A P P S S E
 
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