fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G48590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb021895 not found in 749aa AT5G63470.2 1st_not 0.645051194 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G48590.1     MDTNNQQPPPSAAGIPPPPPGTTISAAGGGASYHHLLQQQQQQLQLFWTYQRQEIEQVND
Sb021895_Sorbi1 -----------------------------------------------SVYTQRECVTYTS
                                                                .* ::*    ..

AT3G48590.1     FKNHQLPLARIKK-----IMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENK
Sb021895_Sorbi1 WRS--LGARRRRREASGAAMACSKPCLSFLAEAAAVIDIGCPLLPGRVPGRN-MPGRHHR
                ::.  *   * ::      * ..:    : ***. ::  .* *:  .:. *. : ...::

AT3G48590.1     RRTLQKN-----------------DIAAAITRT---------------DIFDFLVDIVPR
Sb021895_Sorbi1 RRLPHRRIVVRHPGGRRPARGATPDDAGPGRREAEGAAGLLLGLLAGHDVDEEVEDVGAR
                **  ::.                 * *..  *                *: : : *: .*

AT3G48590.1     DEIKDEAAVLGGGMVVAPTASGVPYYYPPMGQPAGPGGMMI-----------GRPAMDPN
Sb021895_Sorbi1 DGRGDVVPLQGAALVL-------------LGVQPGPDGELEDEELAGLGEQHGRLGGDHA
                *   * ..: *..:*:             :*  .**.* :            ** . *  

AT3G48590.1     GVYVQ-----PPSQAWQSVWQT---------------------------------STGTG
Sb021895_Sorbi1 HVLVGLHDLLDPGQRQLVVLEVRRRRALRLLALVRPERLQLGLLLLEQVVVRHRRRAGCA
                 * *       *.*    * :.                                  :* .

AT3G48590.1     DDVSYGSGGSSGQGNLDGQG----------------
Sb021895_Sorbi1 GHARHYWGSSGGRGLAGGVGQRLVVHGFGLKVAGSL
                ... :  *.*.*:*  .* *
BoxShade v3.31 C (beta, 970507) Output
AT3G48590.1     M D T N N Q Q P P P S A A G I P P P P P G T T I S A A G G G A S Y H H L L Q Q Q Q Q Q L Q L F W T Y Q R Q E I E Q V N D
Sb021895_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S V Y T Q R E C V T Y T S
 
AT3G48590.1     F K N H Q L P L A R I K K - - - - - I M K A D E D V R M I S A E A P I L F A K A C E L F I L E L T I R S W L H A E E N K
Sb021895_Sorbi1    W R S - - L G A R R R R R E A S G A A M A C S K P C L S F L A E A A A V I D I G C P L L P G R V P G R N - M P G R H H R
 
AT3G48590.1     R R T L Q K N - - - - - - - - - - - - - - - - - D I A A A I T R T - - - - - - - - - - - - - - - D I F D F L V D I V P R
Sb021895_Sorbi1    R R L P H R R I V V R H P G G R R P A R G A T P D D A G P G R R E A E G A A G L L L G L L A G H D V D E E V E D V G A R
 
AT3G48590.1     D E I K D E A A V L G G G M V V A P T A S G V P Y Y Y P P M G Q P A G P G G M M I - - - - - - - - - - - G R P A M D P N
Sb021895_Sorbi1    D G R G D V V P L Q G A A L V L - - - - - - - - - - - - - L G V Q P G P D G E L E D E E L A G L G E Q H G R L G G D H A
 
AT3G48590.1     G V Y V Q - - - - - P P S Q A W Q S V W Q T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S T G T G
Sb021895_Sorbi1    H V L V G L H D L L D P G Q R Q L V V L E V R R R R A L R L L A L V R P E R L Q L G L L L L E Q V V V R H R R R A G C A
 
AT3G48590.1     D D V S Y G S G G S S G Q G N L D G Q G - - - - - - - - - - - - - - - -
Sb021895_Sorbi1    G H A R H Y W G S S G G R G L A G G V G Q R L V V H G F G L K V A G S L
 
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