fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G48590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm015491 not found in 229aa AT3G48590.1 1st_1st 0.822525597 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G48590.1     MDTNNQQPPPSAAGI---PPPPPGTTISA-AGGGA--SYHHLLQQQQQQLQLFWTYQRQE
gm015491_Glyma0 METNNQQQQQQGAQAQSGPYPVAGAGGSAGAGAGAPPPFQHLLQQQQQQLQMFWSYQRQE
                *:*****   ..*     * * .*:  ** **.**  .::***********:**:*****

AT3G48590.1     IEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEEN
gm015491_Glyma0 IEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEEN
                **:*********************************************************

AT3G48590.1     KRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAAVLGGGMVVAPTASGVPYYYPPMG
gm015491_Glyma0 KRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDDAALVGA------TASGVPYYYPPIG
                **********************************:**::*.      ***********:*

AT3G48590.1     QPAGPGGMMIGRPAMDP-NGVYVQPPSQAWQSVWQTSTGTGDDVSYGSGGSSGQGNLDGQ
gm015491_Glyma0 QPA---GMMIGRPAVDPATGVYVQPPSQAWQSVWQSA---AEDASYGTGGAGAQRSLDGQ
                ***   ********:** .****************::   .:*.***:**:..* .****

AT3G48590.1     G
gm015491_Glyma0 S
                .
BoxShade v3.31 C (beta, 970507) Output
AT3G48590.1     M D T N N Q Q P P P S A A G I - - - P P P P P G T T I S A - A G G G A - - S Y H H L L Q Q Q Q Q Q L Q L F W T Y Q R Q E
gm015491_Glyma0    M E T N N Q Q Q Q Q Q G A Q A Q S G P Y P V A G A G G S A G A G A G A P P P F Q H L L Q Q Q Q Q Q L Q M F W S Y Q R Q E
 
AT3G48590.1     I E Q V N D F K N H Q L P L A R I K K I M K A D E D V R M I S A E A P I L F A K A C E L F I L E L T I R S W L H A E E N
gm015491_Glyma0    I E H V N D F K N H Q L P L A R I K K I M K A D E D V R M I S A E A P I L F A K A C E L F I L E L T I R S W L H A E E N
 
AT3G48590.1     K R R T L Q K N D I A A A I T R T D I F D F L V D I V P R D E I K D E A A V L G G G M V V A P T A S G V P Y Y Y P P M G
gm015491_Glyma0    K R R T L Q K N D I A A A I T R T D I F D F L V D I V P R D E I K D D A A L V G A - - - - - - T A S G V P Y Y Y P P I G
 
AT3G48590.1     Q P A G P G G M M I G R P A M D P - N G V Y V Q P P S Q A W Q S V W Q T S T G T G D D V S Y G S G G S S G Q G N L D G Q
gm015491_Glyma0    Q P A - - - G M M I G R P A V D P A T G V Y V Q P P S Q A W Q S V W Q S A - - - A E D A S Y G T G G A G A Q R S L D G Q
 
AT3G48590.1     G
gm015491_Glyma0    S
 
0