fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G49690.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm034767 not found in 362aa AT5G57620.1 not_not 0.407653910 III
Gm046260 not found in 399aa AT5G57620.1 not_not 0.404326123 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G49690.1     ----------------------------------MGRAPCCDKANVKKGPWSPEEDAKLK
gm046260_Glyma1 MEGLAKLIFASTKNRKRNLNRERERERERQQHKKMGRAPCCDKNNVKKGPWSPEEDATLK
gm034767_Glyma1 ----------------------------------MGRAPCCDKANVKKGPWSPEEDAALK
                                                  ********* ************* **

AT3G49690.1     SYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEENIICSLYLTI
gm046260_Glyma1 TYIEKNGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFTEEEDNIICSLYISI
gm034767_Glyma1 AYIEKNGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFTEEEDNIICSLYISI
                :***:.***************************************:***:*******::*

AT3G49690.1     GSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLINKQRKE-------------------LQE
gm046260_Glyma1 GSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGRRKQSNFSSKDTNNGIEENSYSNALST
gm034767_Glyma1 GSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGRRKQSNLSAKDTNNGIEENSYSNALSS
                *******************************:.::::.                   *. 

AT3G49690.1     ACMEQQEMMVMMKRQHQQQQIQTSFMMRQDQTMFTWPLHH-------HNVQVPALFMNQT
gm046260_Glyma1 SALERLQLHM------QLQSLQNPFSFYNNPAL--WPKLHPIQEKMIHSLQS----LNDG
gm034767_Glyma1 SALERLQLHM------QLQSLQNPFSFYNNPAL--WPKLHPFQEKMIQSLQS----LNDG
                :.:*: :: :      * *.:*..* : :: ::  **  *       :.:*     :*: 

AT3G49690.1     NSFCDQEDVKPVL---IKNMVKIED-QELEKTNPHHHQDSMTNA-FDHLSFSQLLLDPNH
gm046260_Glyma1 SN--------PVMQNALPNSPHDEQGQKGEFYKPQHDGAKINNPDQVHLLENIPLSNSGV
gm034767_Glyma1 SS--------PVMQNALPNSPHVEQGQKDEFCKPQHDGAKINNP-QVHLLENIPLSNGGV
                ..        **:   : *  : *: *: *  :*:*.  .:.*.   **  .  * : . 

AT3G49690.1     NHLGSGEGFS-MNSILSANTNSPLLNTSN------------------DNQWFGNFQAETV
gm046260_Glyma1 PFVASGSSTNPMHSSLAPRSEAIHVQTNNNVGFQQLGALQNELDEILNNRTMGYVPQEDH
gm034767_Glyma1 PFVASGSSKNPMHSSLAPRSEAIHEQT-NSVGFQQLGALQTELDDILNNRIMGYVPHEDH
                 .:.**.. . *:* *:..:::   :* *                  :*: :* .  *  

AT3G49690.1     NLFSG-----------------ASTSTSADQSTISWED------ISSLVYSDSKQFF--
gm046260_Glyma1 DMASGFDCFREMNDSKDSLIWWSNDSDTKSASSNSWESSATPALLTQGMFQDYELGYSL
gm034767_Glyma1 DMA-GFDCFREMNSSKDSLIWWSNDSDTKSVSSNSWDSSATPALLPQGMFQDYELGYSL
                ::  *                 :. * : . *: **:.      :.. ::.* :  :
BoxShade v3.31 C (beta, 970507) Output
AT3G49690.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M G R A P C C D K A N V K K G P W S P E E D A K L K
gm046260_Glyma1    M E G L A K L I F A S T K N R K R N L N R E R E R E R E R Q Q H K K M G R A P C C D K N N V K K G P W S P E E D A T L K
gm034767_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M G R A P C C D K A N V K K G P W S P E E D A A L K
 
AT3G49690.1     S Y I E N S G T G G N W I A L P Q K I G L K R C G K S C R L R W L N Y L R P N I K H G G F S E E E E N I I C S L Y L T I
gm046260_Glyma1    T Y I E K N G T G G N W I A L P Q K I G L K R C G K S C R L R W L N Y L R P N I K H G G F T E E E D N I I C S L Y I S I
gm034767_Glyma1    A Y I E K N G T G G N W I A L P Q K I G L K R C G K S C R L R W L N Y L R P N I K H G G F T E E E D N I I C S L Y I S I
 
AT3G49690.1     G S R W S I I A A Q L P G R T D N D I K N Y W N T R L K K K L I N K Q R K E - - - - - - - - - - - - - - - - - - - L Q E
gm046260_Glyma1    G S R W S I I A A Q L P G R T D N D I K N Y W N T R L K K K L L G R R K Q S N F S S K D T N N G I E E N S Y S N A L S T
gm034767_Glyma1    G S R W S I I A A Q L P G R T D N D I K N Y W N T R L K K K L L G R R K Q S N L S A K D T N N G I E E N S Y S N A L S S
 
AT3G49690.1     A C M E Q Q E M M V M M K R Q H Q Q Q Q I Q T S F M M R Q D Q T M F T W P L H H - - - - - - - H N V Q V P A L F M N Q T
gm046260_Glyma1    S A L E R L Q L H M - - - - - - Q L Q S L Q N P F S F Y N N P A L - - W P K L H P I Q E K M I H S L Q S - - - - L N D G
gm034767_Glyma1    S A L E R L Q L H M - - - - - - Q L Q S L Q N P F S F Y N N P A L - - W P K L H P F Q E K M I Q S L Q S - - - - L N D G
 
AT3G49690.1     N S F C D Q E D V K P V L - - - I K N M V K I E D - Q E L E K T N P H H H Q D S M T N A - F D H L S F S Q L L L D P N H
gm046260_Glyma1    S N - - - - - - - - P V M Q N A L P N S P H D E Q G Q K G E F Y K P Q H D G A K I N N P D Q V H L L E N I P L S N S G V
gm034767_Glyma1    S S - - - - - - - - P V M Q N A L P N S P H V E Q G Q K D E F C K P Q H D G A K I N N P - Q V H L L E N I P L S N G G V
 
AT3G49690.1     N H L G S G E G F S - M N S I L S A N T N S P L L N T S N - - - - - - - - - - - - - - - - - - D N Q W F G N F Q A E T V
gm046260_Glyma1    P F V A S G S S T N P M H S S L A P R S E A I H V Q T N N N V G F Q Q L G A L Q N E L D E I L N N R T M G Y V P Q E D H
gm034767_Glyma1    P F V A S G S S K N P M H S S L A P R S E A I H E Q T - N S V G F Q Q L G A L Q T E L D D I L N N R I M G Y V P H E D H
 
AT3G49690.1     N L F S G - - - - - - - - - - - - - - - - - A S T S T S A D Q S T I S W E D - - - - - - I S S L V Y S D S K Q F F - -
gm046260_Glyma1    D M A S G F D C F R E M N D S K D S L I W W S N D S D T K S A S S N S W E S S A T P A L L T Q G M F Q D Y E L G Y S L
gm034767_Glyma1    D M A - G F D C F R E M N S S K D S L I W W S N D S D T K S V S S N S W D S S A T P A L L P Q G M F Q D Y E L G Y S L
 
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