fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G49850.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm001979 not found in 299aa AT5G67580.2 1st_not 0.435950413 II
Pt017594 not found in 292aa AT5G67580.2 1st_not 0.431818181 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G49850.1     MGAPKLKWTPEEETALKAGVLKHGTGKWRTILSDPVYSTILKSRSNVDLKDKWRNISVTA
gm001979_Glyma0 MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILTDPEFSSILRMRSNVDLKDKWRNINVTA
pt017594_POPTR_ MGAPKQKWTAEEEAALKAGVLKHGTGKWRTILMDPDFSAVLRLRSNVDLKDKWRNINVTA
                ***** ***.***:******:***:******* ** :*::*: *************.***

AT3G49850.1     LWGSRKKAKLALKRTPLSGSRQDDNATAITIVSLANGDVGGQQIDAPSPPAGSCEPPRPS
gm001979_Glyma0 IWGSRQKAKLALKKNLLPSTKIDNNHLALSTVVQRD-----KEVANPKPLAVSSGTSPNS
pt017594_POPTR_ IWGSRQKAKLALKRSPL-TPKREENGKALSVVVQSN-----EEVVDAKPLAMASGTPRNG
                :****:*******:. *  .: ::*  *:: *   :     :::  ..* * :. ..  .

AT3G49850.1     -----------TSVDKIILEAITSLKRPFGPDGKSILMYIEENFKMQPDMKRLVTSRLKY
gm001979_Glyma0 --KEKISKLQNFQLDNLILESIIKLKEPRGSDQAAIAAYIEDQYCSTPTLRKLLSTKLKH
pt017594_POPTR_ GPKDLLAR-----LDNLILEAITTLKEPSGSDRASIALYIQEKYWAPMNLRKLLGGKLKH
                             :*::***:* .**.* *.*  :*  **::::     :::*:  :**:

AT3G49850.1     LTNVGTLVKKKHKYRISQNYMAEGEGQRSPQ-LLLEGNKENTPKPEENGVKNLTKSQVGG
gm001979_Glyma0 MVASGKLMKVKHKYRIATN-LTISEKRRCSSLLLLEGRPKDSPKAEKTGVNILSKSEIDA
pt017594_POPTR_ LTANGKLIKVKHKYMIASS-STVSEGRRNHP--LPEGKQKEMLKLEKSKNKILTKAQVDQ
                :.  *.*:* **** *: .  : .* :*     * **. ::  * *:.  : *:*:::. 

AT3G49850.1     EVM-IMGMTEKEAAAAAARAVAEAEFAMAEAEEAAREADKAEAEAEAAHIFAKAAMKAVK
gm001979_Glyma0 ELSKMKGVTPQEAAAAAAKAVAEAEAAIAEAEAAAREADAAEAEAEAARVFAKAAMKALK
pt017594_POPTR_ DLLKIRGMTALEAAAAAAAAVAEAETAIAEAEAAAREAEKAEAEAEAAQVFAKAAIKAFK
                ::  : *:*  ******* ****** *:**** *****: ********::*****:**.*

AT3G49850.1     ---YRMHSQTR
gm001979_Glyma0 CKTLRIC----
pt017594_POPTR_ ---HRACHP--
                    *
BoxShade v3.31 C (beta, 970507) Output
AT3G49850.1     M G A P K L K W T P E E E T A L K A G V L K H G T G K W R T I L S D P V Y S T I L K S R S N V D L K D K W R N I S V T A
gm001979_Glyma0    M G A P K Q K W T A E E E A A L K A G V V K H G A G K W R T I L T D P E F S S I L R M R S N V D L K D K W R N I N V T A
pt017594_POPTR_    M G A P K Q K W T A E E E A A L K A G V L K H G T G K W R T I L M D P D F S A V L R L R S N V D L K D K W R N I N V T A
 
AT3G49850.1     L W G S R K K A K L A L K R T P L S G S R Q D D N A T A I T I V S L A N G D V G G Q Q I D A P S P P A G S C E P P R P S
gm001979_Glyma0    I W G S R Q K A K L A L K K N L L P S T K I D N N H L A L S T V V Q R D - - - - - K E V A N P K P L A V S S G T S P N S
pt017594_POPTR_    I W G S R Q K A K L A L K R S P L - T P K R E E N G K A L S V V V Q S N - - - - - E E V V D A K P L A M A S G T P R N G
 
AT3G49850.1     - - - - - - - - - - - T S V D K I I L E A I T S L K R P F G P D G K S I L M Y I E E N F K M Q P D M K R L V T S R L K Y
gm001979_Glyma0    - - K E K I S K L Q N F Q L D N L I L E S I I K L K E P R G S D Q A A I A A Y I E D Q Y C S T P T L R K L L S T K L K H
pt017594_POPTR_    G P K D L L A R - - - - - L D N L I L E A I T T L K E P S G S D R A S I A L Y I Q E K Y W A P M N L R K L L G G K L K H
 
AT3G49850.1     L T N V G T L V K K K H K Y R I S Q N Y M A E G E G Q R S P Q - L L L E G N K E N T P K P E E N G V K N L T K S Q V G G
gm001979_Glyma0    M V A S G K L M K V K H K Y R I A T N - L T I S E K R R C S S L L L L E G R P K D S P K A E K T G V N I L S K S E I D A
pt017594_POPTR_    L T A N G K L I K V K H K Y M I A S S - S T V S E G R R N H P - - L P E G K Q K E M L K L E K S K N K I L T K A Q V D Q
 
AT3G49850.1     E V M - I M G M T E K E A A A A A A R A V A E A E F A M A E A E E A A R E A D K A E A E A E A A H I F A K A A M K A V K
gm001979_Glyma0    E L S K M K G V T P Q E A A A A A A K A V A E A E A A I A E A E A A A R E A D A A E A E A E A A R V F A K A A M K A L K
pt017594_POPTR_    D L L K I R G M T A L E A A A A A A A A V A E A E T A I A E A E A A A R E A E K A E A E A E A A Q V F A K A A I K A F K
 
AT3G49850.1     - - - Y R M H S Q T R
gm001979_Glyma0    C K T L R I C - - - -
pt017594_POPTR_    - - - H R A C H P - -
 
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