fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G49850.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm029847 not found in 298aa AT1G49950.1 not_not 0.431818181 III
Pt036000 not found in 293aa AT5G67580.2 not_not 0.425619834 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G49850.1     MGAPKLKWTPEEETALKAGVLKHGTGKWRTILSDPVYSTILKSRSNVDLKDKWRNISVTA
gm029847_Glyma1 MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILTDPEFSSILRMRSNVDLKDKWRNINVTA
pt036000_POPTR_ MGAPKQKWTSEEEAALKAGVLKHGTGKWRTILMDPEFSAVLRLRSNVDLKDKWRNINVTA
                ***** ***.***:******:***:******* ** :*::*: *************.***

AT3G49850.1     LWGSRKKAKLALKRTPLSGSRQDDNATAITIVSLANGDVGGQQIDAPSPPAGSCEPPRPS
gm029847_Glyma1 IWGSRQKAKLALKKNLLPSPKIDHNHMALSTVVQRDKEV----ADPKPLAVSSGTSPNSK
pt036000_POPTR_ IWGSRKKAKITLKRRPL-TPKREENAKALSTVVQTNEEV----VDAKPLAFASGTPGNGG
                :****:***::**:  *  .: :.*  *:: *   : :*     *. . . .*  . .  

AT3G49850.1     T--------SVDKIILEAITSLKRPFGPDGKSILMYIEENFKMQPDMKRLVTSRLKYLTN
gm029847_Glyma1 EKTSKLQNFQLDNLILESIIKLKEPRGSDKAAIAAYIEDQYCSTPTLRKLLSTKLKHMVA
pt036000_POPTR_ PKDLLA---RLDNLILEAITTLKEPTGSDRASIALYIQEKYWAPMNLRKLLGGKLKHLTA
                          :*::***:* .**.* *.*  :*  **::::     :::*:  :**::. 

AT3G49850.1     VGTLVKKKHKYRISQNYMAEGEGQRSPQLL-LEGNKENTPKPEENGVKNLTKSQVGGEV-
gm029847_Glyma1 CGKLMKVKHKYRIATN-LTISEKRRCSSLVLLEGRPKDSPKAEKTGVHILSKSEIDAELS
pt036000_POPTR_ NGNLIMVQHKYRIAPS-STFSEGRKNHALP--EGKRKDALKLEKSKNKILTKAHIDRDLS
                 *.*:  :*****: .  : .* ::   *   **. ::: * *:.  : *:*:.:. :: 

AT3G49850.1     MIMGMTEKEAAAAAARAVAEAEFAMAEAEEAAREADKAEAEAEAAHIFAKAAMKAVKYRM
gm029847_Glyma1 KMKGVTPQEAAAAAAKAVAEAEAAIAEAEAAAREADAAEAEAEAARVFAKAAMKALK---
pt036000_POPTR_ KIQGMTALEAAAAAAKAVAEAESAIADAEAAAREAEKAEAEAEAAQVFAKAAIKAFKLRA
                 : *:*  *******:****** *:*:** *****: ********::*****:**.*   

AT3G49850.1     HSQTR-
gm029847_Glyma1 CKTLRV
pt036000_POPTR_ CHTW--
BoxShade v3.31 C (beta, 970507) Output
AT3G49850.1     M G A P K L K W T P E E E T A L K A G V L K H G T G K W R T I L S D P V Y S T I L K S R S N V D L K D K W R N I S V T A
gm029847_Glyma1    M G A P K Q K W T A E E E A A L K A G V V K H G A G K W R T I L T D P E F S S I L R M R S N V D L K D K W R N I N V T A
pt036000_POPTR_    M G A P K Q K W T S E E E A A L K A G V L K H G T G K W R T I L M D P E F S A V L R L R S N V D L K D K W R N I N V T A
 
AT3G49850.1     L W G S R K K A K L A L K R T P L S G S R Q D D N A T A I T I V S L A N G D V G G Q Q I D A P S P P A G S C E P P R P S
gm029847_Glyma1    I W G S R Q K A K L A L K K N L L P S P K I D H N H M A L S T V V Q R D K E V - - - - A D P K P L A V S S G T S P N S K
pt036000_POPTR_    I W G S R K K A K I T L K R R P L - T P K R E E N A K A L S T V V Q T N E E V - - - - V D A K P L A F A S G T P G N G G
 
AT3G49850.1     T - - - - - - - - S V D K I I L E A I T S L K R P F G P D G K S I L M Y I E E N F K M Q P D M K R L V T S R L K Y L T N
gm029847_Glyma1    E K T S K L Q N F Q L D N L I L E S I I K L K E P R G S D K A A I A A Y I E D Q Y C S T P T L R K L L S T K L K H M V A
pt036000_POPTR_    P K D L L A - - - R L D N L I L E A I T T L K E P T G S D R A S I A L Y I Q E K Y W A P M N L R K L L G G K L K H L T A
 
AT3G49850.1     V G T L V K K K H K Y R I S Q N Y M A E G E G Q R S P Q L L - L E G N K E N T P K P E E N G V K N L T K S Q V G G E V -
gm029847_Glyma1    C G K L M K V K H K Y R I A T N - L T I S E K R R C S S L V L L E G R P K D S P K A E K T G V H I L S K S E I D A E L S
pt036000_POPTR_    N G N L I M V Q H K Y R I A P S - S T F S E G R K N H A L P - - E G K R K D A L K L E K S K N K I L T K A H I D R D L S
 
AT3G49850.1     M I M G M T E K E A A A A A A R A V A E A E F A M A E A E E A A R E A D K A E A E A E A A H I F A K A A M K A V K Y R M
gm029847_Glyma1    K M K G V T P Q E A A A A A A K A V A E A E A A I A E A E A A A R E A D A A E A E A E A A R V F A K A A M K A L K - - -
pt036000_POPTR_    K I Q G M T A L E A A A A A A K A V A E A E S A I A D A E A A A R E A E K A E A E A E A A Q V F A K A A I K A F K L R A
 
AT3G49850.1     H S Q T R -
gm029847_Glyma1    C K T L R V
pt036000_POPTR_    C H T W - -
 
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