fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G49850.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt036000 not found in 293aa AT5G67580.2 not_not 0.425619834 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G49850.1     MGAPKLKWTPEEETALKAGVLKHGTGKWRTILSDPVYSTILKSRSNVDLKDKWRNISVTA
pt036000_POPTR_ MGAPKQKWTSEEEAALKAGVLKHGTGKWRTILMDPEFSAVLRLRSNVDLKDKWRNINVTA
                ***** ***.***:****************** ** :*::*: *************.***

AT3G49850.1     LWGSRKKAKLALKRTPLSGSRQDDNATAITIVSLANGDVGGQQIDA-----PSPPAGSCE
pt036000_POPTR_ IWGSRKKAKITLKRRPLTPKRE-ENAKALSTVVQTNEEV----VDAKPLAFASGTPGNGG
                :********::*** **: .*: :**.*:: *  :* :*    :**     .* ..*.  

AT3G49850.1     PPRPSTSVDKIILEAITSLKRPFGPDGKSILMYIEENFKMQPDMKRLVTSRLKYLTNVGT
pt036000_POPTR_ PKDLLARLDNLILEAITTLKEPTGSDRASIALYIQEKYWAPMNLRKLLGGKLKHLTANGN
                *    : :*::******:**.* *.*  ** :**:*::    ::::*: .:**:**  *.

AT3G49850.1     LVKKKHKYRIS-QNYMAEGEGQRSPQLLLEGNKENTPKPEENGVKNLTKSQVGGEV-MIM
pt036000_POPTR_ LIMVQHKYRIAPSSTFSEG---RKNHALPEGKRKDALKLEKSKNKILTKAHIDRDLSKIQ
                *:  :*****: .. ::**   *. : * **::::: * *:.  * ***:::. ::  * 

AT3G49850.1     GMTEKEAAAAAARAVAEAEFAMAEAEEAAREADKAEAEAEAAHIFAKAAMKAVKYRM-HS
pt036000_POPTR_ GMTALEAAAAAAKAVAEAESAIADAEAAAREAEKAEAEAEAAQVFAKAAIKAFKLRACHT
                ***  *******:****** *:*:** *****:*********::*****:**.* *  *:

AT3G49850.1     QTR
pt036000_POPTR_ W--
BoxShade v3.31 C (beta, 970507) Output
AT3G49850.1     M G A P K L K W T P E E E T A L K A G V L K H G T G K W R T I L S D P V Y S T I L K S R S N V D L K D K W R N I S V T A
pt036000_POPTR_    M G A P K Q K W T S E E E A A L K A G V L K H G T G K W R T I L M D P E F S A V L R L R S N V D L K D K W R N I N V T A
 
AT3G49850.1     L W G S R K K A K L A L K R T P L S G S R Q D D N A T A I T I V S L A N G D V G G Q Q I D A - - - - - P S P P A G S C E
pt036000_POPTR_    I W G S R K K A K I T L K R R P L T P K R E - E N A K A L S T V V Q T N E E V - - - - V D A K P L A F A S G T P G N G G
 
AT3G49850.1     P P R P S T S V D K I I L E A I T S L K R P F G P D G K S I L M Y I E E N F K M Q P D M K R L V T S R L K Y L T N V G T
pt036000_POPTR_    P K D L L A R L D N L I L E A I T T L K E P T G S D R A S I A L Y I Q E K Y W A P M N L R K L L G G K L K H L T A N G N
 
AT3G49850.1     L V K K K H K Y R I S - Q N Y M A E G E G Q R S P Q L L L E G N K E N T P K P E E N G V K N L T K S Q V G G E V - M I M
pt036000_POPTR_    L I M V Q H K Y R I A P S S T F S E G - - - R K N H A L P E G K R K D A L K L E K S K N K I L T K A H I D R D L S K I Q
 
AT3G49850.1     G M T E K E A A A A A A R A V A E A E F A M A E A E E A A R E A D K A E A E A E A A H I F A K A A M K A V K Y R M - H S
pt036000_POPTR_    G M T A L E A A A A A A K A V A E A E S A I A D A E A A A R E A E K A E A E A E A A Q V F A K A A I K A F K L R A C H T
 
AT3G49850.1     Q T R
pt036000_POPTR_    W - -
 
0