fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G49850.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt017594 not found in 292aa AT5G67580.2 1st_not 0.431818181 II
Pt036000 not found in 293aa AT5G67580.2 not_not 0.425619834 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G49850.1     MGAPKLKWTPEEETALKAGVLKHGTGKWRTILSDPVYSTILKSRSNVDLKDKWRNISVTA
pt017594_POPTR_ MGAPKQKWTAEEEAALKAGVLKHGTGKWRTILMDPDFSAVLRLRSNVDLKDKWRNINVTA
pt036000_POPTR_ MGAPKQKWTSEEEAALKAGVLKHGTGKWRTILMDPEFSAVLRLRSNVDLKDKWRNINVTA
                ***** ***.***:****************** ** :*::*: *************.***

AT3G49850.1     LWGSRKKAKLALKRTPLSGSRQDDNATAITIVSLANGDVGGQQIDAPSPPAGSCEPPR--
pt017594_POPTR_ IWGSRQKAKLALKRSPLTPKRE-ENGKALSVVVQSNEEV----VDA-KPLAMASGTPRNG
pt036000_POPTR_ IWGSRKKAKITLKRRPLTPKRE-ENAKALSTVVQTNEEV----VDA-KPLAFASGTPGNG
                :****:***::*** **: .*: :*..*:: *  :* :*    :** .* * :. .*   

AT3G49850.1     -PS---TSVDKIILEAITSLKRPFGPDGKSILMYIEENFKMQPDMKRLVTSRLKYLTNVG
pt017594_POPTR_ GPKDLLARLDNLILEAITTLKEPSGSDRASIALYIQEKYWAPMNLRKLLGGKLKHLTANG
pt036000_POPTR_ GPKDLLARLDNLILEAITTLKEPTGSDRASIALYIQEKYWAPMNLRKLLGGKLKHLTANG
                 *.   : :*::******:**.* *.*  ** :**:*::    ::::*: .:**:**  *

AT3G49850.1     TLVKKKHKYRI-SQNYMAEGEGQRSPQLLLEGNKENTPKPEENGVKNLTKSQVGGEVM-I
pt017594_POPTR_ KLIKVKHKYMIASSSTVSEG---RRNHPLPEGKQKEMLKLEKSKNKILTKAQVDQDLLKI
pt036000_POPTR_ NLIMVQHKYRIAPSSTFSEG---RKNHALPEGKRKDALKLEKSKNKILTKAHIDRDLSKI
                .*:  :*** * ... .:**   *  : * **::::  * *:.  * ***:::. ::  *

AT3G49850.1     MGMTEKEAAAAAARAVAEAEFAMAEAEEAAREADKAEAEAEAAHIFAKAAMKAVKYRM-H
pt017594_POPTR_ RGMTALEAAAAAAAAVAEAETAIAEAEAAAREAEKAEAEAEAAQVFAKAAIKAFKHRACH
pt036000_POPTR_ QGMTALEAAAAAAKAVAEAESAIADAEAAAREAEKAEAEAEAAQVFAKAAIKAFKLRACH
                 ***  ******* ****** *:*:** *****:*********::*****:**.* *  *

AT3G49850.1     SQTR
pt017594_POPTR_ P---
pt036000_POPTR_ TW--
                .
BoxShade v3.31 C (beta, 970507) Output
AT3G49850.1     M G A P K L K W T P E E E T A L K A G V L K H G T G K W R T I L S D P V Y S T I L K S R S N V D L K D K W R N I S V T A
pt017594_POPTR_    M G A P K Q K W T A E E E A A L K A G V L K H G T G K W R T I L M D P D F S A V L R L R S N V D L K D K W R N I N V T A
pt036000_POPTR_    M G A P K Q K W T S E E E A A L K A G V L K H G T G K W R T I L M D P E F S A V L R L R S N V D L K D K W R N I N V T A
 
AT3G49850.1     L W G S R K K A K L A L K R T P L S G S R Q D D N A T A I T I V S L A N G D V G G Q Q I D A P S P P A G S C E P P R - -
pt017594_POPTR_    I W G S R Q K A K L A L K R S P L T P K R E - E N G K A L S V V V Q S N E E V - - - - V D A - K P L A M A S G T P R N G
pt036000_POPTR_    I W G S R K K A K I T L K R R P L T P K R E - E N A K A L S T V V Q T N E E V - - - - V D A - K P L A F A S G T P G N G
 
AT3G49850.1     - P S - - - T S V D K I I L E A I T S L K R P F G P D G K S I L M Y I E E N F K M Q P D M K R L V T S R L K Y L T N V G
pt017594_POPTR_    G P K D L L A R L D N L I L E A I T T L K E P S G S D R A S I A L Y I Q E K Y W A P M N L R K L L G G K L K H L T A N G
pt036000_POPTR_    G P K D L L A R L D N L I L E A I T T L K E P T G S D R A S I A L Y I Q E K Y W A P M N L R K L L G G K L K H L T A N G
 
AT3G49850.1     T L V K K K H K Y R I - S Q N Y M A E G E G Q R S P Q L L L E G N K E N T P K P E E N G V K N L T K S Q V G G E V M - I
pt017594_POPTR_    K L I K V K H K Y M I A S S S T V S E G - - - R R N H P L P E G K Q K E M L K L E K S K N K I L T K A Q V D Q D L L K I
pt036000_POPTR_    N L I M V Q H K Y R I A P S S T F S E G - - - R K N H A L P E G K R K D A L K L E K S K N K I L T K A H I D R D L S K I
 
AT3G49850.1     M G M T E K E A A A A A A R A V A E A E F A M A E A E E A A R E A D K A E A E A E A A H I F A K A A M K A V K Y R M - H
pt017594_POPTR_    R G M T A L E A A A A A A A A V A E A E T A I A E A E A A A R E A E K A E A E A E A A Q V F A K A A I K A F K H R A C H
pt036000_POPTR_    Q G M T A L E A A A A A A K A V A E A E S A I A D A E A A A R E A E K A E A E A E A A Q V F A K A A I K A F K L R A C H
 
AT3G49850.1     S Q T R
pt017594_POPTR_    P - - -
pt036000_POPTR_    T W - -
 
0