fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G49850.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm001979 not found in 299aa AT5G67580.2 1st_not 0.435950413 II
Gm029847 not found in 298aa AT1G49950.1 not_not 0.431818181 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G49850.1     MGAPKLKWTPEEETALKAGVLKHGTGKWRTILSDPVYSTILKSRSNVDLKDKWRNISVTA
gm001979_Glyma0 MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILTDPEFSSILRMRSNVDLKDKWRNINVTA
gm029847_Glyma1 MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILTDPEFSSILRMRSNVDLKDKWRNINVTA
                ***** ***.***:******:***:*******:** :*:**: *************.***

AT3G49850.1     LWGSRKKAKLALKRTPLSGSRQDDNATAITIVSLANGDVGGQQIDAPSPPA---GSCEPP
gm001979_Glyma0 IWGSRQKAKLALKKNLLPSTKIDNNHLALSTVVQRDKEVAN-----PKPLAVSSGTSPNS
gm029847_Glyma1 IWGSRQKAKLALKKNLLPSPKIDHNHMALSTVVQRDKEVAD-----PKPLAVSSGTSPNS
                :****:*******:. *...: *.*  *:: *   : :*..     *.* *   *:.  .

AT3G49850.1     RPSTS------VDKIILEAITSLKRPFGPDGKSILMYIEENFKMQPDMKRLVTSRLKYLT
gm001979_Glyma0 KEKISKLQNFQLDNLILESIIKLKEPRGSDQAAIAAYIEDQYCSTPTLRKLLSTKLKHMV
gm029847_Glyma1 KEKTSKLQNFQLDNLILESIIKLKEPRGSDKAAIAAYIEDQYCSTPTLRKLLSTKLKHMV
                : . *      :*::***:* .**.* *.*  :*  ***:::   * :::*::::**::.

AT3G49850.1     NVGTLVKKKHKYRISQNYMAEGEGQRSPQLLLEGNKENTPKPEENGVKNLTKSQVGGEVM
gm001979_Glyma0 ASGKLMKVKHKYRIATNLTISEKRRCSSLLLLEGRPKDSPKAEKTGVNILSKSEIDAELS
gm029847_Glyma1 ACGKLMKVKHKYRIATNLTISEKRRCSSLVLLEGRPKDSPKAEKTGVHILSKSEIDAELS
                  *.*:* ******: *   . : : *. :****. :::**.*:.**: *:**::..*: 

AT3G49850.1     IM-GMTEKEAAAAAARAVAEAEFAMAEAEEAAREADKAEAEAEAAHIFAKAAMKAVKYRM
gm001979_Glyma0 KMKGVTPQEAAAAAAKAVAEAEAAIAEAEAAAREADAAEAEAEAARVFAKAAMKALKCKT
gm029847_Glyma1 KMKGVTPQEAAAAAAKAVAEAEAAIAEAEAAAREADAAEAEAEAARVFAKAAMKALKCKT
                 * *:* :*******:****** *:**** ****** ********::********:* : 

AT3G49850.1     HSQTR
gm001979_Glyma0 LRIC-
gm029847_Glyma1 LRV--
BoxShade v3.31 C (beta, 970507) Output
AT3G49850.1     M G A P K L K W T P E E E T A L K A G V L K H G T G K W R T I L S D P V Y S T I L K S R S N V D L K D K W R N I S V T A
gm001979_Glyma0    M G A P K Q K W T A E E E A A L K A G V V K H G A G K W R T I L T D P E F S S I L R M R S N V D L K D K W R N I N V T A
gm029847_Glyma1    M G A P K Q K W T A E E E A A L K A G V V K H G A G K W R T I L T D P E F S S I L R M R S N V D L K D K W R N I N V T A
 
AT3G49850.1     L W G S R K K A K L A L K R T P L S G S R Q D D N A T A I T I V S L A N G D V G G Q Q I D A P S P P A - - - G S C E P P
gm001979_Glyma0    I W G S R Q K A K L A L K K N L L P S T K I D N N H L A L S T V V Q R D K E V A N - - - - - P K P L A V S S G T S P N S
gm029847_Glyma1    I W G S R Q K A K L A L K K N L L P S P K I D H N H M A L S T V V Q R D K E V A D - - - - - P K P L A V S S G T S P N S
 
AT3G49850.1     R P S T S - - - - - - V D K I I L E A I T S L K R P F G P D G K S I L M Y I E E N F K M Q P D M K R L V T S R L K Y L T
gm001979_Glyma0    K E K I S K L Q N F Q L D N L I L E S I I K L K E P R G S D Q A A I A A Y I E D Q Y C S T P T L R K L L S T K L K H M V
gm029847_Glyma1    K E K T S K L Q N F Q L D N L I L E S I I K L K E P R G S D K A A I A A Y I E D Q Y C S T P T L R K L L S T K L K H M V
 
AT3G49850.1     N V G T L V K K K H K Y R I S Q N Y M A E G E G Q R S P Q L L L E G N K E N T P K P E E N G V K N L T K S Q V G G E V M
gm001979_Glyma0    A S G K L M K V K H K Y R I A T N L T I S E K R R C S S L L L L E G R P K D S P K A E K T G V N I L S K S E I D A E L S
gm029847_Glyma1    A C G K L M K V K H K Y R I A T N L T I S E K R R C S S L V L L E G R P K D S P K A E K T G V H I L S K S E I D A E L S
 
AT3G49850.1     I M - G M T E K E A A A A A A R A V A E A E F A M A E A E E A A R E A D K A E A E A E A A H I F A K A A M K A V K Y R M
gm001979_Glyma0    K M K G V T P Q E A A A A A A K A V A E A E A A I A E A E A A A R E A D A A E A E A E A A R V F A K A A M K A L K C K T
gm029847_Glyma1    K M K G V T P Q E A A A A A A K A V A E A E A A I A E A E A A A R E A D A A E A E A E A A R V F A K A A M K A L K C K T
 
AT3G49850.1     H S Q T R
gm001979_Glyma0    L R I C -
gm029847_Glyma1    L R V - -
 
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