fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G49930.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt038538 not found in 252aa AT1G27730.1 not_not 0.441077441 III
Pt020831 SGKKPRLTLSLQKEKT in 235/250 AT3G19580.2 not_not 0.430976430 III
Pt029671 not found in 286aa AT1G27730.1 not_not 0.414141414 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G49930.1     ----------------------------------------------MALDTLNSPTSTTT
pt020831_POPTR_ ----------------------------------------------MALEALNSP-----
pt029671_POPTR_ MADDDDRPPPLSLSLSIPFFLSLEILFVCSSRCPLTQENSVSRIQIMALEALNSP-----
pt038538_POPTR_ ----------------------------------------------MALEALNSP-----
                                                              ***::****     

AT3G49930.1     TTAPPPFLRCLDETEPEN-LESWTKRKRTKRHRIDQPNPPPSEEEYLALCLLMLARGSSD
pt020831_POPTR_ TTATP-F--NYEDT--------CVKRKRSKRSRSES---PSTEEEYLALCLIMLARGGST
pt029671_POPTR_ TTAAP-F--NYEET--------WIKRKRSKRPRSES---PSTEEEYLALCLIMLARGGS-
pt038538_POPTR_ TTATPSF--QFEESSTHCVVEPWAKRKRSKRPRLDH---QPTEEEYLALCLVMLARGSTN
                ***.* *    :::          ****:** * :     .:*********:*****.: 

AT3G49930.1     H-----------HSPPSD-HH--SLSP-----LSDHQKDYKCSVCGKSFPSYQALGGHKT
pt020831_POPTR_ TSTTTANKETAPPAPP---------QPPTLN------LSYKCTVCNKAFPSYQALGGHKA
pt029671_POPTR_ ------------PAPP---------QPPTLD------LSYKCTVCNKAFSSYQALGGHKA
pt038538_POPTR_ L-----------PIPALDGHHKKSLAPPTASTSSEQKISYKCSVCNKEFPSYQALGGHKA
                              *.          *           .***:**.* *.*********:

AT3G49930.1     SHRKPVS-----VDVNNSNGTVTNNGNISNGLVGQSGKTHNCSICFKSFPSGQALGGHKR
pt020831_POPTR_ SHRKSSSEST--TAAENPSTS-TTP-ATTT---NTSGRTHECSICHKTFPTGQALGGHKR
pt029671_POPTR_ SHRKSSSESTVATAAENPSTS-TTTNTTTT---TTNGRTHECSICHKTFLTGQALGGHKR
pt038538_POPTR_ SHRKLA------GGGEDQTTSCTTTSATTTPVSNGSGRVHECSICHRTFPTGQALGGHKR
                ****           :: . : *.    :.     .*:.*:****.::* :*********

AT3G49930.1     CHYDG----------------------GNGNSNGDNS------HKFDLNLPA-DQVSDET
pt020831_POPTR_ CHYEGTIGGNNNSSTSAAITTSDSGAVGGGGVSQSQSQRSGGGFDFDLNLPALPEFEGPR
pt029671_POPTR_ CHYEGTIGGNNSSSASAAITTSDGGAVGGGGVIQSKSQRSGGGFDFDLNLPALPEFEGPR
pt038538_POPTR_ CHYEGIIGG---AEKSGVTSTSE----GAGSTNTRTHSHNHSHHDFDLNVPALPEFSSDF
                ***:*                      * *.            ..****:**  :...  

AT3G49930.1     IGKSQLSG-EETKSVL----------------------------
pt020831_POPTR_ IGHQALLRDQEVESPLSGKK-------PRLTLSLQKEKTGVVSL
pt029671_POPTR_ ISLQALCGDQEVESPLPGKK-------PRLMFSLKQEKTDMGSS
pt038538_POPTR_ F----VSGDDEVMSPLPAAKRIRILMAPRIEVSQAQ--------
                :    :   :*. * *
BoxShade v3.31 C (beta, 970507) Output
AT3G49930.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A L D T L N S P T S T T T
pt020831_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A L E A L N S P - - - - -
pt029671_POPTR_    M A D D D D R P P P L S L S L S I P F F L S L E I L F V C S S R C P L T Q E N S V S R I Q I M A L E A L N S P - - - - -
pt038538_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A L E A L N S P - - - - -
 
AT3G49930.1     T T A P P P F L R C L D E T E P E N - L E S W T K R K R T K R H R I D Q P N P P P S E E E Y L A L C L L M L A R G S S D
pt020831_POPTR_    T T A T P - F - - N Y E D T - - - - - - - - C V K R K R S K R S R S E S - - - P S T E E E Y L A L C L I M L A R G G S T
pt029671_POPTR_    T T A A P - F - - N Y E E T - - - - - - - - W I K R K R S K R P R S E S - - - P S T E E E Y L A L C L I M L A R G G S -
pt038538_POPTR_    T T A T P S F - - Q F E E S S T H C V V E P W A K R K R S K R P R L D H - - - Q P T E E E Y L A L C L V M L A R G S T N
 
AT3G49930.1     H - - - - - - - - - - - H S P P S D - H H - - S L S P - - - - - L S D H Q K D Y K C S V C G K S F P S Y Q A L G G H K T
pt020831_POPTR_    T S T T T A N K E T A P P A P P - - - - - - - - - Q P P T L N - - - - - - L S Y K C T V C N K A F P S Y Q A L G G H K A
pt029671_POPTR_    - - - - - - - - - - - - P A P P - - - - - - - - - Q P P T L D - - - - - - L S Y K C T V C N K A F S S Y Q A L G G H K A
pt038538_POPTR_    L - - - - - - - - - - - P I P A L D G H H K K S L A P P T A S T S S E Q K I S Y K C S V C N K E F P S Y Q A L G G H K A
 
AT3G49930.1     S H R K P V S - - - - - V D V N N S N G T V T N N G N I S N G L V G Q S G K T H N C S I C F K S F P S G Q A L G G H K R
pt020831_POPTR_    S H R K S S S E S T - - T A A E N P S T S - T T P - A T T T - - - N T S G R T H E C S I C H K T F P T G Q A L G G H K R
pt029671_POPTR_    S H R K S S S E S T V A T A A E N P S T S - T T T N T T T T - - - T T N G R T H E C S I C H K T F L T G Q A L G G H K R
pt038538_POPTR_    S H R K L A - - - - - - G G G E D Q T T S C T T T S A T T T P V S N G S G R V H E C S I C H R T F P T G Q A L G G H K R
 
AT3G49930.1     C H Y D G - - - - - - - - - - - - - - - - - - - - - - G N G N S N G D N S - - - - - - H K F D L N L P A - D Q V S D E T
pt020831_POPTR_    C H Y E G T I G G N N N S S T S A A I T T S D S G A V G G G G V S Q S Q S Q R S G G G F D F D L N L P A L P E F E G P R
pt029671_POPTR_    C H Y E G T I G G N N S S S A S A A I T T S D G G A V G G G G V I Q S K S Q R S G G G F D F D L N L P A L P E F E G P R
pt038538_POPTR_    C H Y E G I I G G - - - A E K S G V T S T S E - - - - G A G S T N T R T H S H N H S H H D F D L N V P A L P E F S S D F
 
AT3G49930.1     I G K S Q L S G - E E T K S V L - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt020831_POPTR_    I G H Q A L L R D Q E V E S P L S G K K - - - - - - - P R L T L S L Q K E K T G V V S L
pt029671_POPTR_    I S L Q A L C G D Q E V E S P L P G K K - - - - - - - P R L M F S L K Q E K T D M G S S
pt038538_POPTR_    F - - - - V S G D D E V M S P L P A A K R I R I L M A P R I E V S Q A Q - - - - - - - -
 
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