fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G49930.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt017464 not found in 238aa AT1G27730.1 1st_not 0.474747474 II
Pt038538 not found in 252aa AT1G27730.1 not_not 0.441077441 III
Pt020831 SGKKPRLTLSLQKEKT in 235/250 AT3G19580.2 not_not 0.430976430 III
Pt029671 not found in 286aa AT1G27730.1 not_not 0.414141414 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G49930.1     ----------------------------------------------MALDTLNSPTSTTT
pt020831_POPTR_ ----------------------------------------------MALEALNSP-----
pt038538_POPTR_ ----------------------------------------------MALEALNSP-----
pt017464_POPTR_ ----------------------------------------------MALEALNSP-----
pt029671_POPTR_ MADDDDRPPPLSLSLSIPFFLSLEILFVCSSRCPLTQENSVSRIQIMALEALNSP-----
                                                              ***::****     

AT3G49930.1     TTAPPPFLRCLDET-EPENLESWTKRKRTKRHRIDQPNPPPSEEEYLALCLLMLARGSSD
pt020831_POPTR_ TTATP-FN--YEDT--------CVKRKRSKRSRSES---PSTEEEYLALCLIMLARGGST
pt038538_POPTR_ TTATPSFQ--FEESSTHCVVEPWAKRKRSKRPRLDH---QPTEEEYLALCLVMLARGSTN
pt017464_POPTR_ TTAPPSFQ--FEDLSLPCAGEPWVKRKRSKRPRLDH---QPTEEEYLALCLVMLARG---
pt029671_POPTR_ TTAAP-FN--YEET--------WIKRKRSKRPRSES---PSTEEEYLALCLIMLARGGS-
                ***.* *    ::           ****:** * :     .:*********:*****   

AT3G49930.1     --------HH----SPPSDHHSLSPLSDHQKDYKCSVCGKSFPSYQALGGHKTSHRKPV-
pt020831_POPTR_ TSTTT----ANKETAPPAPPQP----PTLNLSYKCTVCNKAFPSYQALGGHKASHRKSSS
pt038538_POPTR_ LPIPALDGHHKKSLAPPTASTS----SEQKISYKCSVCNKEFPSYQALGGHKASHRKLA-
pt017464_POPTR_ ---------HQKSLTPSTVFTS----SELKNSYKCSVCNKEFPSYQALGGHKASHRKLA-
pt029671_POPTR_ ----------------PAPPQP----PTLDLSYKCTVCNKAFSSYQALGGHKASHRKSSS
                                .:   .    .  . .***:**.* *.*********:****   

AT3G49930.1     -----SVDVNNSNGTVTNNG-NISNGLVGQSGKTHNCSICFKSFPSGQALGGHKRCHYDG
pt020831_POPTR_ EST--TAAENPSTSTTP-AT--TTNT----SGRTHECSICHKTFPTGQALGGHKRCHYEG
pt038538_POPTR_ -----GGGEDQTTSCTTTSA--TTTPVSNGSGRVHECSICHRTFPTGQALGGHKRCHYEG
pt017464_POPTR_ -----GGGEDQTTSSTTTSAITATKTVSNGSGKTHECSICHKTFPTGQALGGHKRCHYEG
pt029671_POPTR_ ESTVATAAENPSTSTTTNTT--TTTT----NGRTHECSICHKTFLTGQALGGHKRCHYEG
                         : :.. ..      :.     .*:.*:****.::* :************:*

AT3G49930.1     GNGNSNGD-----------------------------NSHKFDLNLPA-DQVSDETIGKS
pt020831_POPTR_ TIGGNNNSSTSAAITTSDSGAVGGGGVSQSQSQRSG-GGFDFDLNLPALPEFEGPRIGHQ
pt038538_POPTR_ IIGGAEKS----GVTSTSEGA----GSTNTRTHSHNHSHHDFDLNVPALPEFS----SDF
pt017464_POPTR_ IIGGGEKS----GVTSTSESA----GSTNTRTHSHN----EFDLNIPALPEFS----SCF
pt029671_POPTR_ TIGGNNSSSASAAITTSDGGAVGGGGVIQSKSQRSG-GGFDFDLNLPALPEFEGPRISLQ
                  *. : .                                .****:**  :..    .  

AT3G49930.1     QLSGE-ETKSVL----------------------------
pt020831_POPTR_ ALLRDQEVESPLSGKK-------PRLTLSLQKEKTGVVSL
pt038538_POPTR_ FVSGDDEVMSPLPAAKRIRILMAPRIEVSQAQ--------
pt017464_POPTR_ SVSGEDEVMSPLPAAKKLRISMPPRFEVSQAQ--------
pt029671_POPTR_ ALCGDQEVESPLPGKK-------PRLMFSLKQEKTDMGSS
                 :  : *. * *
BoxShade v3.31 C (beta, 970507) Output
AT3G49930.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A L D T L N S P T S T T T
pt020831_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A L E A L N S P - - - - -
pt038538_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A L E A L N S P - - - - -
pt017464_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A L E A L N S P - - - - -
pt029671_POPTR_    M A D D D D R P P P L S L S L S I P F F L S L E I L F V C S S R C P L T Q E N S V S R I Q I M A L E A L N S P - - - - -
 
AT3G49930.1     T T A P P P F L R C L D E T - E P E N L E S W T K R K R T K R H R I D Q P N P P P S E E E Y L A L C L L M L A R G S S D
pt020831_POPTR_    T T A T P - F N - - Y E D T - - - - - - - - C V K R K R S K R S R S E S - - - P S T E E E Y L A L C L I M L A R G G S T
pt038538_POPTR_    T T A T P S F Q - - F E E S S T H C V V E P W A K R K R S K R P R L D H - - - Q P T E E E Y L A L C L V M L A R G S T N
pt017464_POPTR_    T T A P P S F Q - - F E D L S L P C A G E P W V K R K R S K R P R L D H - - - Q P T E E E Y L A L C L V M L A R G - - -
pt029671_POPTR_    T T A A P - F N - - Y E E T - - - - - - - - W I K R K R S K R P R S E S - - - P S T E E E Y L A L C L I M L A R G G S -
 
AT3G49930.1     - - - - - - - - H H - - - - S P P S D H H S L S P L S D H Q K D Y K C S V C G K S F P S Y Q A L G G H K T S H R K P V -
pt020831_POPTR_    T S T T T - - - - A N K E T A P P A P P Q P - - - - P T L N L S Y K C T V C N K A F P S Y Q A L G G H K A S H R K S S S
pt038538_POPTR_    L P I P A L D G H H K K S L A P P T A S T S - - - - S E Q K I S Y K C S V C N K E F P S Y Q A L G G H K A S H R K L A -
pt017464_POPTR_    - - - - - - - - - H Q K S L T P S T V F T S - - - - S E L K N S Y K C S V C N K E F P S Y Q A L G G H K A S H R K L A -
pt029671_POPTR_    - - - - - - - - - - - - - - - - P A P P Q P - - - - P T L D L S Y K C T V C N K A F S S Y Q A L G G H K A S H R K S S S
 
AT3G49930.1     - - - - - S V D V N N S N G T V T N N G - N I S N G L V G Q S G K T H N C S I C F K S F P S G Q A L G G H K R C H Y D G
pt020831_POPTR_    E S T - - T A A E N P S T S T T P - A T - - T T N T - - - - S G R T H E C S I C H K T F P T G Q A L G G H K R C H Y E G
pt038538_POPTR_    - - - - - G G G E D Q T T S C T T T S A - - T T T P V S N G S G R V H E C S I C H R T F P T G Q A L G G H K R C H Y E G
pt017464_POPTR_    - - - - - G G G E D Q T T S S T T T S A I T A T K T V S N G S G K T H E C S I C H K T F P T G Q A L G G H K R C H Y E G
pt029671_POPTR_    E S T V A T A A E N P S T S T T T N T T - - T T T T - - - - N G R T H E C S I C H K T F L T G Q A L G G H K R C H Y E G
 
AT3G49930.1     G N G N S N G D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - N S H K F D L N L P A - D Q V S D E T I G K S
pt020831_POPTR_    T I G G N N N S S T S A A I T T S D S G A V G G G G V S Q S Q S Q R S G - G G F D F D L N L P A L P E F E G P R I G H Q
pt038538_POPTR_    I I G G A E K S - - - - G V T S T S E G A - - - - G S T N T R T H S H N H S H H D F D L N V P A L P E F S - - - - S D F
pt017464_POPTR_    I I G G G E K S - - - - G V T S T S E S A - - - - G S T N T R T H S H N - - - - E F D L N I P A L P E F S - - - - S C F
pt029671_POPTR_    T I G G N N S S S A S A A I T T S D G G A V G G G G V I Q S K S Q R S G - G G F D F D L N L P A L P E F E G P R I S L Q
 
AT3G49930.1     Q L S G E - E T K S V L - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt020831_POPTR_    A L L R D Q E V E S P L S G K K - - - - - - - P R L T L S L Q K E K T G V V S L
pt038538_POPTR_    F V S G D D E V M S P L P A A K R I R I L M A P R I E V S Q A Q - - - - - - - -
pt017464_POPTR_    S V S G E D E V M S P L P A A K K L R I S M P P R F E V S Q A Q - - - - - - - -
pt029671_POPTR_    A L C G D Q E V E S P L P G K K - - - - - - - P R L M F S L K Q E K T D M G S S
 
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