fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G49930.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os013920 GSEEEHLALSLLMLAR in 66/238 AT1G27730.1 not_not 0.407407407 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G49930.1     MALDTLNSPTSTTTTTAPP----------PFLRCLDETEPENLESWTKRKRT-KRHRIDQ
Os013920_Os03t0 MAVEEVLDGAAPMLSSSPAASGEEVGARKPQQRC------GGAEGWSKRKRSRRRHRDRA
                **:: : . ::.  :::*.          *  **       . *.*:****: :***   

AT3G49930.1     PNPPP--SEEEYLALCLLMLARGSSDHHSPPSDHHSLSPLSDHQKDYKCSVCGKSFPSYQ
Os013920_Os03t0 AAPPPHGSEEEHLALSLLMLARGHRDPSPAPQEQHG------------CSVCGRVFSSYQ
                . ***  ****:***.*******  *  ..*.::*.            *****: *.***

AT3G49930.1     ALGGHKTSHR--------------KPVSVDVNNSNGTVTNNGNISNGLVGQSGKTHNCSI
Os013920_Os03t0 ALGGHKTSHRPRTPPTMAAVVVVDEPAATTASPA-ASSSNSGSGSGG--GGGNKVHECSV
                **********              :*.:. .. : .: :*.*. *.*  * ..*.*:**:

AT3G49930.1     CFKSFPSGQALGGHKRCHYDG--GNGNSNGDNSHKFDLNLPADQVSDETIGKSQLSGEET
Os013920_Os03t0 CKKTFPTGQALGGHKRCHYEGPIGSGGGAAVAGRGFDLNLPAVALPDIMTERCLPAAAEE
                * *:**:************:*  *.*.. .  .: *******  :.*    :.  :. * 

AT3G49930.1     KSVL---------------
Os013920_Os03t0 EEVLSPLASFKKPRLMIPA
                :.**
BoxShade v3.31 C (beta, 970507) Output
AT3G49930.1     M A L D T L N S P T S T T T T T A P P - - - - - - - - - - P F L R C L D E T E P E N L E S W T K R K R T - K R H R I D Q
Os013920_Os03t0    M A V E E V L D G A A P M L S S S P A A S G E E V G A R K P Q Q R C - - - - - - G G A E G W S K R K R S R R R H R D R A
 
AT3G49930.1     P N P P P - - S E E E Y L A L C L L M L A R G S S D H H S P P S D H H S L S P L S D H Q K D Y K C S V C G K S F P S Y Q
Os013920_Os03t0    A A P P P H G S E E E H L A L S L L M L A R G H R D P S P A P Q E Q H G - - - - - - - - - - - - C S V C G R V F S S Y Q
 
AT3G49930.1     A L G G H K T S H R - - - - - - - - - - - - - - K P V S V D V N N S N G T V T N N G N I S N G L V G Q S G K T H N C S I
Os013920_Os03t0    A L G G H K T S H R P R T P P T M A A V V V V D E P A A T T A S P A - A S S S N S G S G S G G - - G G G N K V H E C S V
 
AT3G49930.1     C F K S F P S G Q A L G G H K R C H Y D G - - G N G N S N G D N S H K F D L N L P A D Q V S D E T I G K S Q L S G E E T
Os013920_Os03t0    C K K T F P T G Q A L G G H K R C H Y E G P I G S G G G A A V A G R G F D L N L P A V A L P D I M T E R C L P A A A E E
 
AT3G49930.1     K S V L - - - - - - - - - - - - - - -
Os013920_Os03t0    E E V L S P L A S F K K P R L M I P A
 
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