fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G49930.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os041668 not found in 247aa AT3G49930.1 1st_1st 0.454545454 Ia
Os013920 GSEEEHLALSLLMLAR in 66/238 AT1G27730.1 not_not 0.407407407 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G49930.1     MALDTL---------NSPTSTTTTTAPPPFLRCLDETE--------------PENLESWT
Os041668_Os12t0 MAVEAVLE-------ASRSSSE------------EEAEVIVTHGGGGGGGGGGGQVEGWG
Os013920_Os03t0 MAVEEVLDGAAPMLSSSPAASG------------EEVGARKPQQRCGGA-------EGWS
                **:: :          * :::             :*.                   *.* 

AT3G49930.1     KRKRTKRHRIDQPNPPP---SEEEYLALCLLMLARGSSDHHSPPSDHHSLSPLSDHQKDY
Os041668_Os12t0 KRKRSRRR---RPQLPP---SEEEYLALCLLMLARGRRDG----DDVAASASAAAAAVEH
Os013920_Os03t0 KRKRSRRRHRDRAAAPPPHGSEEEHLALSLLMLARGHRD------------PSPAPQEQH
                ****::*:   :.  **   ****:***.*******  *            . .    ::

AT3G49930.1     KCSVCGKSFPSYQALGGHKTSHRKPV--------SVDVNNSNGTV-----TNNGNISNGL
Os041668_Os12t0 RCSVCGKAFASYQALGGHKASHRKPPPPAMVDDDEVVVETKPAAI-----ATPSSSASGV
Os013920_Os03t0 GCSVCGRVFSSYQALGGHKTSHRPRTPPTMA---AVVVVDEPAATTASPAASSSNSGSGS
                 *****: *.*********:***            * *  . .:      :. .. ..* 

AT3G49930.1     VGQSG-KTHNCSICFKSFPSGQALGGHKRCHYDGGNGNSNGDN--------------SHK
Os041668_Os12t0 SGGGGGRAHECNVCGKAFPTGQALGGHKRCHYDGTIGSAAGAGASKPAAKTTVAVAASRG
Os013920_Os03t0 GGGGGNKVHECSVCKKTFPTGQALGGHKRCHYEGPIGSGGGAA------------VAGRG
                 * .* :.*:*.:* *:**:************:*  *.. *                .: 

AT3G49930.1     FDLNLPADQVSDETIGKSQLS---GEETKSVL---------------
Os041668_Os12t0 FDLNLP--ALPDVAAAADQRC---AAEDDEVLSPLA-FKKPRLMIPA
Os013920_Os03t0 FDLNLPAVALPDIMT---ERCLPAAAEEEEVLSPLASFKKPRLMIPA
                ******   :.*      : .   . * ..**
BoxShade v3.31 C (beta, 970507) Output
AT3G49930.1     M A L D T L - - - - - - - - - N S P T S T T T T T A P P P F L R C L D E T E - - - - - - - - - - - - - - P E N L E S W T
Os041668_Os12t0    M A V E A V L E - - - - - - - A S R S S S E - - - - - - - - - - - - E E A E V I V T H G G G G G G G G G G G Q V E G W G
Os013920_Os03t0    M A V E E V L D G A A P M L S S S P A A S G - - - - - - - - - - - - E E V G A R K P Q Q R C G G A - - - - - - - E G W S
 
AT3G49930.1     K R K R T K R H R I D Q P N P P P - - - S E E E Y L A L C L L M L A R G S S D H H S P P S D H H S L S P L S D H Q K D Y
Os041668_Os12t0    K R K R S R R R - - - R P Q L P P - - - S E E E Y L A L C L L M L A R G R R D G - - - - D D V A A S A S A A A A A V E H
Os013920_Os03t0    K R K R S R R R H R D R A A A P P P H G S E E E H L A L S L L M L A R G H R D - - - - - - - - - - - - P S P A P Q E Q H
 
AT3G49930.1     K C S V C G K S F P S Y Q A L G G H K T S H R K P V - - - - - - - - S V D V N N S N G T V - - - - - T N N G N I S N G L
Os041668_Os12t0    R C S V C G K A F A S Y Q A L G G H K A S H R K P P P P A M V D D D E V V V E T K P A A I - - - - - A T P S S S A S G V
Os013920_Os03t0    G C S V C G R V F S S Y Q A L G G H K T S H R P R T P P T M A - - - A V V V V D E P A A T T A S P A A S S S N S G S G S
 
AT3G49930.1     V G Q S G - K T H N C S I C F K S F P S G Q A L G G H K R C H Y D G G N G N S N G D N - - - - - - - - - - - - - - S H K
Os041668_Os12t0    S G G G G G R A H E C N V C G K A F P T G Q A L G G H K R C H Y D G T I G S A A G A G A S K P A A K T T V A V A A S R G
Os013920_Os03t0    G G G G G N K V H E C S V C K K T F P T G Q A L G G H K R C H Y E G P I G S G G G A A - - - - - - - - - - - - V A G R G
 
AT3G49930.1     F D L N L P A D Q V S D E T I G K S Q L S - - - G E E T K S V L - - - - - - - - - - - - - - -
Os041668_Os12t0    F D L N L P - - A L P D V A A A A D Q R C - - - A A E D D E V L S P L A - F K K P R L M I P A
Os013920_Os03t0    F D L N L P A V A L P D I M T - - - E R C L P A A A E E E E V L S P L A S F K K P R L M I P A
 
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