fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G49930.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm014082 not found in 233aa AT1G27730.1 not_not 0.437710437 III
Gm047952 not found in 240aa AT1G27730.1 not_not 0.434343434 III
Gm008898 not found in 233aa AT1G27730.1 not_not 0.420875420 III
Gm028869 HAFRGFDLNLPAPLTEFW in 205/257 AT3G19580.2 not_not 0.410774410 III
Gm054573 HTLRGFDLNLPAPLTEFW in 208/260 AT5G04340.1 not_not 0.404040404 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G49930.1     MALDTLNSPTSTTTTTAPPPFLRCLDET--EPENL----ESWTKRKRTKRHRIDQ--PNP
gm054573_Glyma2 MALEALNSPTAAT-----TPFRGYQEEEEDEEADL-HLREPWAKRKRSKRPRFE------
gm014082_Glyma0 MALEALQSPTTAT-----PSFSPF------EETSLSYLETPWTKGKRSKRSRTEQQLQHP
gm028869_Glyma1 MALEALNSPTAAT-----TPFRGYQEEE--EEVDL-HLREPWAKRKRSKRPRFE------
gm008898_Glyma0 MALEALQSPRTAT-----PSFSPF------EETNLSYLETPWTKGKRSKRSRMEQQLQHS
gm047952_Glyma1 MALEALNSPTTTA-----PSF-PF------DDPTI-----PWAKRKRSKRSR-----DHP
                ***::*:** :::     ..*         :   :     .*:* **:** *        

AT3G49930.1     PPSEEEYLALCLLMLARGSS-----D----HHSPPSDHHSLSPLSDHQKDYKCSVCGKSF
gm054573_Glyma2 --TEEEYLALCLIMLAQSGNTRNIHNNN--TQLPSSSLSDKEASPPVKLTHRCTVCNKAF
gm014082_Glyma0 SCTEEEYLALCLIMLARGGAGSV--S----TAKPAVSDNNSAPLSAAKLSYKCSVCNKAF
gm028869_Glyma1 --SEEEYLALCLIMLAQSGN-----NNN--TQLPSSSQSHKEASPPLKLSHRCTVCNKAF
gm008898_Glyma0 SCTEEEYLALCLIMLAHGGAGGV--P----AAKPAVSDNNSAPLPAAKLSYKCSVCNKAF
gm047952_Glyma1 S--EEEYLALCLIMLARGGTTTV--NNRHVSPPPPQPQPQPTPDPSTKLSYKCSVCDKSF
                   *********:***:..              *.       . .  :  ::*:**.*:*

AT3G49930.1     PSYQALGGHKTSHRKPVSVDVNNS----NGTVTNNGNISNGLVG----QSGKTHNCSICF
gm054573_Glyma2 GSYQALGGHKASHRKASS--ESNP----TAS---VSALANDSVSASTVGGGRMHECSICH
gm014082_Glyma0 SSYQALGGHKASHRKLAG--ENHP----TSSAVTTSSASN--------GGGRTHECSICH
gm028869_Glyma1 PSYQALGGHKASHRKASS--ESNT----TASAVAVSATANDSVSASTVGGGRMHECSICH
gm008898_Glyma0 SSYQALGGHKASHRKLGG--EHHS----TSSAVTTSSASN--------GGARTHECSICQ
gm047952_Glyma1 PSYQALGGHKASHRKLAGAAEDQPPSTTTSSAAATSSAS----------GGKAHECSICH
                 *********:****  .    :.    ..:    .  :          ..: *:**** 

AT3G49930.1     KSFPSGQALGGHKRCHYDGG----NGNSNG----------------DNSHK--------F
gm054573_Glyma2 KSFPTGQALGGHKRCHYDGGNNHSNSNANGNNSSGAT-TSDGGAA-SSSHTL-----RGF
gm014082_Glyma0 KTFSTGQALGGHKRCHYEG--------GN----SAVT-ASEGV---GSTHT---GSHRDF
gm028869_Glyma1 KSFPTGQALGGHKRCHYDGGNNHSNSNANGNNSSGVT-TSDGGAASSSSHAF-----RGF
gm008898_Glyma0 KTFPTGQALGGHKRCHYEG--------GN----SAVT-ASEGV---GSTHT---GSHRDF
gm047952_Glyma1 KSFPTGQALGGHKRCHYEGNGNGNNNNSN----SVVTVASEGV---GSTHTVSHGHHRDF
                *:*.:************:*        .*                 ..:*         *

AT3G49930.1     DLNLPA------------DQ------VSDET-------IGKSQL--SGEETKSVL--
gm054573_Glyma2 DLNLPA-PLTEFWSPMGFDFGKKKVGGEQEVESPLPVTAKRPRL-FTGEDDETA---
gm014082_Glyma0 DLNLPAFP----------DF-SARFFVDDEVTSPHP--SKKSRFNLTIPKIEIPQY-
gm028869_Glyma1 DLNLPA-PLTEFWSPAGFDFGKKKVGVEQEVESPLPVTAKRPRL-FSGEDNEEA---
gm008898_Glyma0 DLNLPAFP----------DF-STRFFVDDEVTSPHP--SKKSRLNLTIPKIEIPQY-
gm047952_Glyma1 DLNIPAFP----------DF-STKVG-EDEVESPHPV-MKKPRL-FVIPKIEIPQFQ
                ***:**            *        .:*.         :.::     . :
BoxShade v3.31 C (beta, 970507) Output
AT3G49930.1     M A L D T L N S P T S T T T T T A P P P F L R C L D E T - - E P E N L - - - - E S W T K R K R T K R H R I D Q - - P N P
gm054573_Glyma2    M A L E A L N S P T A A T - - - - - T P F R G Y Q E E E E D E E A D L - H L R E P W A K R K R S K R P R F E - - - - - -
gm014082_Glyma0    M A L E A L Q S P T T A T - - - - - P S F S P F - - - - - - E E T S L S Y L E T P W T K G K R S K R S R T E Q Q L Q H P
gm028869_Glyma1    M A L E A L N S P T A A T - - - - - T P F R G Y Q E E E - - E E V D L - H L R E P W A K R K R S K R P R F E - - - - - -
gm008898_Glyma0    M A L E A L Q S P R T A T - - - - - P S F S P F - - - - - - E E T N L S Y L E T P W T K G K R S K R S R M E Q Q L Q H S
gm047952_Glyma1    M A L E A L N S P T T T A - - - - - P S F - P F - - - - - - D D P T I - - - - - P W A K R K R S K R S R - - - - - D H P
 
AT3G49930.1     P P S E E E Y L A L C L L M L A R G S S - - - - - D - - - - H H S P P S D H H S L S P L S D H Q K D Y K C S V C G K S F
gm054573_Glyma2    - - T E E E Y L A L C L I M L A Q S G N T R N I H N N N - - T Q L P S S S L S D K E A S P P V K L T H R C T V C N K A F
gm014082_Glyma0    S C T E E E Y L A L C L I M L A R G G A G S V - - S - - - - T A K P A V S D N N S A P L S A A K L S Y K C S V C N K A F
gm028869_Glyma1    - - S E E E Y L A L C L I M L A Q S G N - - - - - N N N - - T Q L P S S S Q S H K E A S P P L K L S H R C T V C N K A F
gm008898_Glyma0    S C T E E E Y L A L C L I M L A H G G A G G V - - P - - - - A A K P A V S D N N S A P L P A A K L S Y K C S V C N K A F
gm047952_Glyma1    S - - E E E Y L A L C L I M L A R G G T T T V - - N N R H V S P P P P Q P Q P Q P T P D P S T K L S Y K C S V C D K S F
 
AT3G49930.1     P S Y Q A L G G H K T S H R K P V S V D V N N S - - - - N G T V T N N G N I S N G L V G - - - - Q S G K T H N C S I C F
gm054573_Glyma2    G S Y Q A L G G H K A S H R K A S S - - E S N P - - - - T A S - - - V S A L A N D S V S A S T V G G G R M H E C S I C H
gm014082_Glyma0    S S Y Q A L G G H K A S H R K L A G - - E N H P - - - - T S S A V T T S S A S N - - - - - - - - G G G R T H E C S I C H
gm028869_Glyma1    P S Y Q A L G G H K A S H R K A S S - - E S N T - - - - T A S A V A V S A T A N D S V S A S T V G G G R M H E C S I C H
gm008898_Glyma0    S S Y Q A L G G H K A S H R K L G G - - E H H S - - - - T S S A V T T S S A S N - - - - - - - - G G A R T H E C S I C Q
gm047952_Glyma1    P S Y Q A L G G H K A S H R K L A G A A E D Q P P S T T T S S A A A T S S A S - - - - - - - - - - G G K A H E C S I C H
 
AT3G49930.1     K S F P S G Q A L G G H K R C H Y D G G - - - - N G N S N G - - - - - - - - - - - - - - - - D N S H K - - - - - - - - F
gm054573_Glyma2    K S F P T G Q A L G G H K R C H Y D G G N N H S N S N A N G N N S S G A T - T S D G G A A - S S S H T L - - - - - R G F
gm014082_Glyma0    K T F S T G Q A L G G H K R C H Y E G - - - - - - - - G N - - - - S A V T - A S E G V - - - G S T H T - - - G S H R D F
gm028869_Glyma1    K S F P T G Q A L G G H K R C H Y D G G N N H S N S N A N G N N S S G V T - T S D G G A A S S S S H A F - - - - - R G F
gm008898_Glyma0    K T F P T G Q A L G G H K R C H Y E G - - - - - - - - G N - - - - S A V T - A S E G V - - - G S T H T - - - G S H R D F
gm047952_Glyma1    K S F P T G Q A L G G H K R C H Y E G N G N G N N N N S N - - - - S V V T V A S E G V - - - G S T H T V S H G H H R D F
 
AT3G49930.1     D L N L P A - - - - - - - - - - - - D Q - - - - - - V S D E T - - - - - - - I G K S Q L - - S G E E T K S V L - -
gm054573_Glyma2    D L N L P A - P L T E F W S P M G F D F G K K K V G G E Q E V E S P L P V T A K R P R L - F T G E D D E T A - - -
gm014082_Glyma0    D L N L P A F P - - - - - - - - - - D F - S A R F F V D D E V T S P H P - - S K K S R F N L T I P K I E I P Q Y -
gm028869_Glyma1    D L N L P A - P L T E F W S P A G F D F G K K K V G V E Q E V E S P L P V T A K R P R L - F S G E D N E E A - - -
gm008898_Glyma0    D L N L P A F P - - - - - - - - - - D F - S T R F F V D D E V T S P H P - - S K K S R L N L T I P K I E I P Q Y -
gm047952_Glyma1    D L N I P A F P - - - - - - - - - - D F - S T K V G - E D E V E S P H P V - M K K P R L - F V I P K I E I P Q F Q
 
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