fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G49950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm047288 not found in 415aa AT3G49950.1 not_1st 0.578298397 II
Gm034198 not found in 460aa AT3G49950.1 not_1st 0.420468557 II
Pt000302 not found in 457aa AT3G49950.1 not_1st 0.628853267 II
Pt003363 not found in 448aa AT3G49950.1 not_1st 0.440197287 II
Pt037069 not found in 449aa AT3G49950.1 not_1st 0.438964241 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G49950.1     ----------------------MTKTRILNP--TRFP--------SPKPLRGC---GDAN
pt003363_POPTR_ -------------MKTELRGNT-TSISLQNP--SLFNT---PQSSLSGALKGCLGSLDGA
pt000302_POPTR_ MQSTETPLPHWHQIITPFSNPTMNINQTQRT--RHWP--GFP---TSKSLRSF---GDAN
gm047288_Glyma1 ----------------------MNKNQIPRP--RPWPASGFP--TTSKALSNL---GNAN
pt037069_POPTR_ -------------MKTELRGNSNTSISLQNP--SLFNN---PQSSLSGALNGCLGSLDGA
gm034198_Glyma1 MHVTSSQ----SHMKAELKGT--TSISFQNPTTTLFNN---P---LSGALKGCLGSLDGA
                                       .     ..    :          . .* .     :. 

AT3G49950.1     FMEQLLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRAVSKTPT
pt003363_POPTR_ CIEKLLLHCASALEHNDGTLVQQVMWVLNNVASLVGDPNQRLTSWFLRALVSRA-SK--V
pt000302_POPTR_ CMEQLLVHCANAIESNNATLSQQIVWVLNNIAPPDGDSNQRLTFAFLRALIARA-TKSCT
gm047288_Glyma1 CMEQLLVHCANAIETNDVTLAQQILWVLNNIAPHDGDSNQRLASGFLRALTARA-AKTGT
pt037069_POPTR_ CIEKLLLHCASALEHNDGTLAQQVMWVLNNVASLVGDPNQRLTSWFLRALISRA-SK--V
gm034198_Glyma1 CIEKLLLHCASALESNDVTLAQQVMWVLNNVASPVGDTNQRLTSWFLRALISRA-SR--I
                 :*:**:***.*:: *: :* :*::*****:*.  **..***:  ***** :** ::   

AT3G49950.1     LSSTISFLPQADEL----HRFSVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIV
pt003363_POPTR_ CPTAMDF--DGSST-IRRRQMSVTELAVYVDLIPWHRFGFCASNSAIFKAIEGYSKVHIL
pt000302_POPTR_ CKLLAAMANAHYNLALHTHKFSVIELASFVDVTPWHRFGFTAANAAILEAVEGYLVIHIV
gm047288_Glyma1 CKMLVS---AGTNLSIDTHRFNIIELANFVDLTPWHRFGFTAANAAVLEATEGFSVVHIV
pt037069_POPTR_ CPTAMNF--DGSST-IRRRNMSVTELAVYVDLIPWHRFGFCASNSAILKAIEGYSKVHIL
gm034198_Glyma1 CPTAMSF--KGSNT-IQRRLMSVTELAGYVDLIPWHRFGYCASNNEIYKAITGFQRVHIV
                            .     : :.: *** :**: ******: *:*  :  *  *:  :**:

AT3G49950.1     DLSLTHCMQIPTLIDAMASRLNK--PPPLLKLTVVSSS--DHFPPFINISYEELGSKLVN
pt003363_POPTR_ DFSITHCMQWPTLIDALAKRPE---GPPSLRITVPSCR--PPVPPFLNVSCEEVGLRLSN
pt000302_POPTR_ DLSLTHCMQIPTLIDAIANRFE---VPPLIKLTVAGAT--EDVPPMLDLSYEELGSKLVN
gm047288_Glyma1 DLSLTHCMQIPTLVDAIASRQHHDAPPPIIKLTVADACCRDHIPPMLDLSYEELGAKLVS
pt037069_POPTR_ DFSITHCMQWPTLIDALAIRPE---GPPSLRITVPSCR--PPVPPFLNVSCEEVGLRLSN
gm034198_Glyma1 DFSITHCMQWPTFIDALAKRPE---GPPSLRITVPSCR--PHVPPLVNISIHEVGLRLGN
                *:*:***** **::**:* * .    ** :::** ..     .**::::* .*:* :* .

AT3G49950.1     FATTRNITMEFTIVP---------------STYSDGFSSLLQQLRI---YPSSFN----E
pt003363_POPTR_ FAKFRDVPFEFNVID-DPSYLASTEIMPKESSHDFHFESLLNHL-----TPSVLNLRDDE
pt000302_POPTR_ FAWSRNVIMEFRIIP---------------SSYADGFSSLIEQLRVQHLVHAESG----E
gm047288_Glyma1 FARSRNVIMEFRVVS---------------SSYQDGFAT----------EPSTPS----E
pt037069_POPTR_ FAKYRDVPFEFNVFDHDPSSFASSEIMSQESSHDFHFESLLNHL-----TPAMLDLRDDE
gm034198_Glyma1 FAKFRDVPFEFNVIG-NTGPLTTAEL--SDESTNFHFEAMLSLL-----NPTMLNLREDE
                **  *:: :** :.                .:    * :            :  .    *

AT3G49950.1     ALVVNCHMMLRYIPE-EPLT-------------SSSSS---LRTVFLKQLRSLNPRIVTL
pt003363_POPTR_ ALVINCQNWLRYLSNIEQQGS------------SVQYS--SLRDAFLRTVKAFNPCIVIV
pt000302_POPTR_ ALVINCHMMLHYIPE-ETLSDFPSSKSNPYSYESSCSSMSSFRTTFLKSLRSLDPTIVVL
gm047288_Glyma1 ALVINCHMMLHYIPD-ETLSD--TTDLTSYVYDSSSSA---------ASLRGLDPTVVIL
pt037069_POPTR_ ALVINCQNWLRYLSD-EEKGN------------SVQDS--SLRDAFLCTVKGFNPCIVVV
gm034198_Glyma1 ALVINCQNWLRYLSD-DRKGI------------SRQSL--SLRDAFLNIIKGLNPRIVLL
                ***:**:  *:*:.: :                *               ::.::* :* :

AT3G49950.1     IEEDVDLTSENLVNRLKSAFNYFWIPFDTTDTFM---SEQRRWYEAEISWKIENVVAKEG
pt003363_POPTR_ VDEDSDLSAPSLSSRITTCFNYLWIPFDALETFLPKDSSQRIEYESDIGHKIENIISFEG
pt000302_POPTR_ VDEDADLTSNNLDSRLRSAFNYLWIPFDTVDTFLPRGSKQRQWYEADVCWKIMNLIAHEG
gm047288_Glyma1 VDEDADLTSNNLVCRLRSAFNFLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIAHEG
pt037069_POPTR_ VDEDSDLSAPSLSSRITTCFNFLWIPFDALETFLLKDSSQRIEYESDIGHKIENIISFEG
gm034198_Glyma1 VDEDCDLSASSLTSRITTCFNHMWIPFDALETFLPKDSCQRSEFESDIGQKIENIISYEG
                ::** **:: .*  *: :.**.:***:*: :**:   * **  :*:::  ** *::: **

AT3G49950.1     AERVERTETKRRWIERMREAEFGGVRVKEDAVADVKAMLEEHAVGWGMKKEDDDESLVLT
pt003363_POPTR_ LQRIERLEPGIKVSERMKNAGFFSVPFCEDTIGEVRSLLEEHASGWGMKRGEDH-MLMLT
pt000302_POPTR_ LQRVERLEPKIQWIQRMRNADFRGISFAEDAISEVKTMLDEHAAGWGLKKEDDD--LVLT
gm047288_Glyma1 LQRVERVEPKNKWEERMKNASFQGVGFSEDSVAEVKAMLDEHAAGWGLKKEDEH--IVLT
pt037069_POPTR_ AQRIERLESGIKLAQRMKNAGFSSVPFCEDTIGEVRSLLEEHAGGWGMKREEDH-MLVLT
gm034198_Glyma1 HQRIERSESGVQMSQRMKNVGYLSVPFCDETVREIKGLLDEHASGWGMKREEG--MLVLT
                 :*:** *.  :  :**::. : .: . :::: ::: :*:*** ***:*: :    ::**

AT3G49950.1     WKGHSVVFATVWVPI-------------
pt003363_POPTR_ WKGHNSVFATAWVPIDLQD---------
pt000302_POPTR_ WKGHNVVFASAWLPV-------------
gm047288_Glyma1 WKGHNVVFASA-----------------
pt037069_POPTR_ WKGHNSVFSTAWVPNGLQE---------
gm034198_Glyma1 WKGNSCVFATAWVPCEMRDHIGIDAGLS
                ***:. **::.
BoxShade v3.31 C (beta, 970507) Output
AT3G49950.1     - - - - - - - - - - - - - - - - - - - - - - M T K T R I L N P - - T R F P - - - - - - - - S P K P L R G C - - - G D A N
pt003363_POPTR_    - - - - - - - - - - - - - M K T E L R G N T - T S I S L Q N P - - S L F N T - - - P Q S S L S G A L K G C L G S L D G A
pt000302_POPTR_    M Q S T E T P L P H W H Q I I T P F S N P T M N I N Q T Q R T - - R H W P - - G F P - - - T S K S L R S F - - - G D A N
gm047288_Glyma1    - - - - - - - - - - - - - - - - - - - - - - M N K N Q I P R P - - R P W P A S G F P - - T T S K A L S N L - - - G N A N
pt037069_POPTR_    - - - - - - - - - - - - - M K T E L R G N S N T S I S L Q N P - - S L F N N - - - P Q S S L S G A L N G C L G S L D G A
gm034198_Glyma1    M H V T S S Q - - - - S H M K A E L K G T - - T S I S F Q N P T T T L F N N - - - P - - - L S G A L K G C L G S L D G A
 
AT3G49950.1     F M E Q L L L H C A T A I D S N D A A L T H Q I L W V L N N I A P P D G D S T Q R L T S A F L R A L L S R A V S K T P T
pt003363_POPTR_    C I E K L L L H C A S A L E H N D G T L V Q Q V M W V L N N V A S L V G D P N Q R L T S W F L R A L V S R A - S K - - V
pt000302_POPTR_    C M E Q L L V H C A N A I E S N N A T L S Q Q I V W V L N N I A P P D G D S N Q R L T F A F L R A L I A R A - T K S C T
gm047288_Glyma1    C M E Q L L V H C A N A I E T N D V T L A Q Q I L W V L N N I A P H D G D S N Q R L A S G F L R A L T A R A - A K T G T
pt037069_POPTR_    C I E K L L L H C A S A L E H N D G T L A Q Q V M W V L N N V A S L V G D P N Q R L T S W F L R A L I S R A - S K - - V
gm034198_Glyma1    C I E K L L L H C A S A L E S N D V T L A Q Q V M W V L N N V A S P V G D T N Q R L T S W F L R A L I S R A - S R - - I
 
AT3G49950.1     L S S T I S F L P Q A D E L - - - - H R F S V V E L A A F V D L T P W H R F G F I A A N A A I L T A V E G Y S T V H I V
pt003363_POPTR_    C P T A M D F - - D G S S T - I R R R Q M S V T E L A V Y V D L I P W H R F G F C A S N S A I F K A I E G Y S K V H I L
pt000302_POPTR_    C K L L A A M A N A H Y N L A L H T H K F S V I E L A S F V D V T P W H R F G F T A A N A A I L E A V E G Y L V I H I V
gm047288_Glyma1    C K M L V S - - - A G T N L S I D T H R F N I I E L A N F V D L T P W H R F G F T A A N A A V L E A T E G F S V V H I V
pt037069_POPTR_    C P T A M N F - - D G S S T - I R R R N M S V T E L A V Y V D L I P W H R F G F C A S N S A I L K A I E G Y S K V H I L
gm034198_Glyma1    C P T A M S F - - K G S N T - I Q R R L M S V T E L A G Y V D L I P W H R F G Y C A S N N E I Y K A I T G F Q R V H I V
 
AT3G49950.1     D L S L T H C M Q I P T L I D A M A S R L N K - - P P P L L K L T V V S S S - - D H F P P F I N I S Y E E L G S K L V N
pt003363_POPTR_    D F S I T H C M Q W P T L I D A L A K R P E - - - G P P S L R I T V P S C R - - P P V P P F L N V S C E E V G L R L S N
pt000302_POPTR_    D L S L T H C M Q I P T L I D A I A N R F E - - - V P P L I K L T V A G A T - - E D V P P M L D L S Y E E L G S K L V N
gm047288_Glyma1    D L S L T H C M Q I P T L V D A I A S R Q H H D A P P P I I K L T V A D A C C R D H I P P M L D L S Y E E L G A K L V S
pt037069_POPTR_    D F S I T H C M Q W P T L I D A L A I R P E - - - G P P S L R I T V P S C R - - P P V P P F L N V S C E E V G L R L S N
gm034198_Glyma1    D F S I T H C M Q W P T F I D A L A K R P E - - - G P P S L R I T V P S C R - - P H V P P L V N I S I H E V G L R L G N
 
AT3G49950.1     F A T T R N I T M E F T I V P - - - - - - - - - - - - - - - S T Y S D G F S S L L Q Q L R I - - - Y P S S F N - - - - E
pt003363_POPTR_    F A K F R D V P F E F N V I D - D P S Y L A S T E I M P K E S S H D F H F E S L L N H L - - - - - T P S V L N L R D D E
pt000302_POPTR_    F A W S R N V I M E F R I I P - - - - - - - - - - - - - - - S S Y A D G F S S L I E Q L R V Q H L V H A E S G - - - - E
gm047288_Glyma1    F A R S R N V I M E F R V V S - - - - - - - - - - - - - - - S S Y Q D G F A T - - - - - - - - - - E P S T P S - - - - E
pt037069_POPTR_    F A K Y R D V P F E F N V F D H D P S S F A S S E I M S Q E S S H D F H F E S L L N H L - - - - - T P A M L D L R D D E
gm034198_Glyma1    F A K F R D V P F E F N V I G - N T G P L T T A E L - - S D E S T N F H F E A M L S L L - - - - - N P T M L N L R E D E
 
AT3G49950.1     A L V V N C H M M L R Y I P E - E P L T - - - - - - - - - - - - - S S S S S - - - L R T V F L K Q L R S L N P R I V T L
pt003363_POPTR_    A L V I N C Q N W L R Y L S N I E Q Q G S - - - - - - - - - - - - S V Q Y S - - S L R D A F L R T V K A F N P C I V I V
pt000302_POPTR_    A L V I N C H M M L H Y I P E - E T L S D F P S S K S N P Y S Y E S S C S S M S S F R T T F L K S L R S L D P T I V V L
gm047288_Glyma1    A L V I N C H M M L H Y I P D - E T L S D - - T T D L T S Y V Y D S S S S A - - - - - - - - - A S L R G L D P T V V I L
pt037069_POPTR_    A L V I N C Q N W L R Y L S D - E E K G N - - - - - - - - - - - - S V Q D S - - S L R D A F L C T V K G F N P C I V V V
gm034198_Glyma1    A L V I N C Q N W L R Y L S D - D R K G I - - - - - - - - - - - - S R Q S L - - S L R D A F L N I I K G L N P R I V L L
 
AT3G49950.1     I E E D V D L T S E N L V N R L K S A F N Y F W I P F D T T D T F M - - - S E Q R R W Y E A E I S W K I E N V V A K E G
pt003363_POPTR_    V D E D S D L S A P S L S S R I T T C F N Y L W I P F D A L E T F L P K D S S Q R I E Y E S D I G H K I E N I I S F E G
pt000302_POPTR_    V D E D A D L T S N N L D S R L R S A F N Y L W I P F D T V D T F L P R G S K Q R Q W Y E A D V C W K I M N L I A H E G
gm047288_Glyma1    V D E D A D L T S N N L V C R L R S A F N F L W I P Y D T V D T F L P R G S K Q R Q W Y E A D I C W K I E N V I A H E G
pt037069_POPTR_    V D E D S D L S A P S L S S R I T T C F N F L W I P F D A L E T F L L K D S S Q R I E Y E S D I G H K I E N I I S F E G
gm034198_Glyma1    V D E D C D L S A S S L T S R I T T C F N H M W I P F D A L E T F L P K D S C Q R S E F E S D I G Q K I E N I I S Y E G
 
AT3G49950.1     A E R V E R T E T K R R W I E R M R E A E F G G V R V K E D A V A D V K A M L E E H A V G W G M K K E D D D E S L V L T
pt003363_POPTR_    L Q R I E R L E P G I K V S E R M K N A G F F S V P F C E D T I G E V R S L L E E H A S G W G M K R G E D H - M L M L T
pt000302_POPTR_    L Q R V E R L E P K I Q W I Q R M R N A D F R G I S F A E D A I S E V K T M L D E H A A G W G L K K E D D D - - L V L T
gm047288_Glyma1    L Q R V E R V E P K N K W E E R M K N A S F Q G V G F S E D S V A E V K A M L D E H A A G W G L K K E D E H - - I V L T
pt037069_POPTR_    A Q R I E R L E S G I K L A Q R M K N A G F S S V P F C E D T I G E V R S L L E E H A G G W G M K R E E D H - M L V L T
gm034198_Glyma1    H Q R I E R S E S G V Q M S Q R M K N V G Y L S V P F C D E T V R E I K G L L D E H A S G W G M K R E E G - - M L V L T
 
AT3G49950.1     W K G H S V V F A T V W V P I - - - - - - - - - - - - -
pt003363_POPTR_    W K G H N S V F A T A W V P I D L Q D - - - - - - - - -
pt000302_POPTR_    W K G H N V V F A S A W L P V - - - - - - - - - - - - -
gm047288_Glyma1    W K G H N V V F A S A - - - - - - - - - - - - - - - - -
pt037069_POPTR_    W K G H N S V F S T A W V P N G L Q E - - - - - - - - -
gm034198_Glyma1    W K G N S C V F A T A W V P C E M R D H I G I D A G L S
 
0