fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G49950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb006681 PHAAGGLGLGLFLDVG in 18/455 AT3G49950.1 1st_1st 0.559802712 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G49950.1     ---MTKT--------------------------RILNPTRFPSPKPLRGCGDANF---ME
Sb006681_Sorbi1 MMQFTHTAPPPPPHAAGGLGLGLFLDVGAPRAARGPWPGSFPTPASKISLGNLNSTSCME
                   :*:*                          *   *  **:* .  . *: *    **

AT3G49950.1     QLLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRAVSKTPTLSS
Sb006681_Sorbi1 QLLVHCANAIEANDATLTQQILWVLNNIAPPDGDSNQRLTAAFLCALVARA-SRTGACKA
                ***:***.**::***:**:****************.****:*** **::** *:* : .:

AT3G49950.1     TISFLPQADE-----LHRFSVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDL
Sb006681_Sorbi1 VTAAVAAAVESAALHVHRFTAVELASFVDLTPWHRFGYTAANAAILEAVEGFPVVHVVEL
                . : :. * *     :***:.****:***********: ******* ****:..**:*:*

AT3G49950.1     SLTHCMQIPTLIDAMASRLNKPPPLLKLTVVSSSDHF-PPFINISYEELGSKLVNFATTR
Sb006681_Sorbi1 GTTHCMQIPTLIDMLASRA-EGPPILRLTVADVAPSAPPPALDMSYEELGAKLVNFARSR
                . *********** :***  : **:*:***.. :    ** :::******:****** :*

AT3G49950.1     NITMEFTIVPSTYSDGFSSLLQQLRIYPSSFN--EALVVNCHMMLRYIPEEPLTSSS---
Sb006681_Sorbi1 NMSMDFRVVPTSPADALTSLVDQLRVQQLVLDGTEALVVNCHMLLHTVPDETAGSVSLTQ
                *::*:* :**:: :*.::**::***:    ::  *********:*: :*:*.  * *   

AT3G49950.1     -SSLRTVFLKQLRSLNPRIVTLIEEDVDLTSENLVNRLKSAFNYFWIPFDTTDTFM---S
Sb006681_Sorbi1 PVSLRTMLLKSLRTLDPNLVVVVEEDADFTAGDVVGRLRAAFNFLWIPYDAVDTFLPKGS
                  ****::**.**:*:*.:*.::***.*:*: ::*.**::***::***:*:.***:   *

AT3G49950.1     EQRRWYEAEISWKIENVVAKEGAERVERTETKRRWIERMREAEFGGVRVKEDAVADVKAM
Sb006681_Sorbi1 EQRRWYEAEIGWKVENVLAQEGVERVERQEDRGRWGQRMRSAGFRAVAFGEEAAGEVKAM
                **********.**:***:*:**.***** * : ** :***.* * .* . *:*..:****

AT3G49950.1     LEEHAVGWGMKKEDDDESLVLTWKGHSVVFATVWVPI--
Sb006681_Sorbi1 LNEHAAGWGMKREDDD--LVLTWKGHNVVFASAWAPSPS
                *:***.*****:****  ********.****:.*.*
BoxShade v3.31 C (beta, 970507) Output
AT3G49950.1     - - - M T K T - - - - - - - - - - - - - - - - - - - - - - - - - - R I L N P T R F P S P K P L R G C G D A N F - - - M E
Sb006681_Sorbi1    M M Q F T H T A P P P P P H A A G G L G L G L F L D V G A P R A A R G P W P G S F P T P A S K I S L G N L N S T S C M E
 
AT3G49950.1     Q L L L H C A T A I D S N D A A L T H Q I L W V L N N I A P P D G D S T Q R L T S A F L R A L L S R A V S K T P T L S S
Sb006681_Sorbi1    Q L L V H C A N A I E A N D A T L T Q Q I L W V L N N I A P P D G D S N Q R L T A A F L C A L V A R A - S R T G A C K A
 
AT3G49950.1     T I S F L P Q A D E - - - - - L H R F S V V E L A A F V D L T P W H R F G F I A A N A A I L T A V E G Y S T V H I V D L
Sb006681_Sorbi1    V T A A V A A A V E S A A L H V H R F T A V E L A S F V D L T P W H R F G Y T A A N A A I L E A V E G F P V V H V V E L
 
AT3G49950.1     S L T H C M Q I P T L I D A M A S R L N K P P P L L K L T V V S S S D H F - P P F I N I S Y E E L G S K L V N F A T T R
Sb006681_Sorbi1    G T T H C M Q I P T L I D M L A S R A - E G P P I L R L T V A D V A P S A P P P A L D M S Y E E L G A K L V N F A R S R
 
AT3G49950.1     N I T M E F T I V P S T Y S D G F S S L L Q Q L R I Y P S S F N - - E A L V V N C H M M L R Y I P E E P L T S S S - - -
Sb006681_Sorbi1    N M S M D F R V V P T S P A D A L T S L V D Q L R V Q Q L V L D G T E A L V V N C H M L L H T V P D E T A G S V S L T Q
 
AT3G49950.1     - S S L R T V F L K Q L R S L N P R I V T L I E E D V D L T S E N L V N R L K S A F N Y F W I P F D T T D T F M - - - S
Sb006681_Sorbi1    P V S L R T M L L K S L R T L D P N L V V V V E E D A D F T A G D V V G R L R A A F N F L W I P Y D A V D T F L P K G S
 
AT3G49950.1     E Q R R W Y E A E I S W K I E N V V A K E G A E R V E R T E T K R R W I E R M R E A E F G G V R V K E D A V A D V K A M
Sb006681_Sorbi1    E Q R R W Y E A E I G W K V E N V L A Q E G V E R V E R Q E D R G R W G Q R M R S A G F R A V A F G E E A A G E V K A M
 
AT3G49950.1     L E E H A V G W G M K K E D D D E S L V L T W K G H S V V F A T V W V P I - -
Sb006681_Sorbi1    L N E H A A G W G M K R E D D D - - L V L T W K G H N V V F A S A W A P S P S
 
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