fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G49950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm047288 not found in 415aa AT3G49950.1 not_1st 0.578298397 II
Gm034198 not found in 460aa AT3G49950.1 not_1st 0.420468557 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G49950.1     ----------------MTKTRILNPTRF----P------SPKPLRGCGDANFMEQLLLHC
gm034198_Glyma1 MHVTSSQSHMKAELKGTTSISFQNPTTTLFNNPLSG---ALKGCLGSLDGACIEKLLLHC
gm047288_Glyma1 ----------------MNKNQIPRPRPW----PASGFPTTSKALSNLGNANCMEQLLVHC
                                 ..  : .*       *      : *   .  :.  :*:**:**

AT3G49950.1     ATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRAVSKTPTLSSTISFLP
gm034198_Glyma1 ASALESNDVTLAQQVMWVLNNVASPVGDTNQRLTSWFLRALISRA---SRICPTAMSFKG
gm047288_Glyma1 ANAIETNDVTLAQQILWVLNNIAPHDGDSNQRLASGFLRALTARA-AKTGTCKMLVSAGT
                *.*:::**.:*::*::*****:*.  **:.***:* ***** :**   :      :*   

AT3G49950.1     QAD-ELHRFSVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDLSLTHCMQIPT
gm034198_Glyma1 SNTIQRRLMSVTELAGYVDLIPWHRFGYCASNNEIYKAITGFQRVHIVDFSITHCMQWPT
gm047288_Glyma1 NLSIDTHRFNIIELANFVDLTPWHRFGFTAANAAVLEATEGFSVVHIVDLSLTHCMQIPT
                .   : : :.: *** :*** ******: *:*  :  *  *:. *****:*:***** **

AT3G49950.1     LIDAMASRL--NKPPPLLKLTVVSS--SDHFPPFINISYEELGSKLVNFATTRNITMEFT
gm034198_Glyma1 FIDALAKR---PEGPPSLRITVPSC--RPHVPPLVNISIHEVGLRLGNFAKFRDVPFEFN
gm047288_Glyma1 LVDAIASRQHHDAPPPIIKLTVADACCRDHIPPMLDLSYEELGAKLVSFARSRNVIMEFR
                ::**:*.*      ** :::** ..    *.**::::* .*:* :* .**  *:: :** 

AT3G49950.1     IVPST-------YSD-----GFSSLLQQLRIYPSSFN----EALVVNCHMMLRYIPEEP-
gm034198_Glyma1 VIGNTGPLTTAELSDESTNFHFEAMLSLL--NPTMLNLREDEALVINCQNWLRYLSDDRK
gm047288_Glyma1 VVSSS-------YQD-----GFAT-------EPSTPS----EALVINCHMMLHYIPDET-
                :: .:        .*      * :        *:  .    ****:**:  *:*:.::  

AT3G49950.1     -LTSSSSSLRTVF-----LKQLRSLNPRIVTLIEEDVDLTSENLVNRLKSAFNYFWIPFD
gm034198_Glyma1 GISRQSLSLRDAF-----LNIIKGLNPRIVLLVDEDCDLSASSLTSRITTCFNHMWIPFD
gm047288_Glyma1 -LSDTTDLTSYVYDSSSSAASLRGLDPTVVILVDEDADLTSNNLVCRLRSAFNFLWIPYD
                 ::  :     .:        ::.*:* :* *::** **::..*. *: :.**.:***:*

AT3G49950.1     TTDTFM---SEQRRWYEAEISWKIENVVAKEGAERVERTETKRRWIERMREAEFGGVRVK
gm034198_Glyma1 ALETFLPKDSCQRSEFESDIGQKIENIISYEGHQRIERSESGVQMSQRMKNVGYLSVPFC
gm047288_Glyma1 TVDTFLPRGSKQRQWYEADICWKIENVIAHEGLQRVERVEPKNKWEERMKNASFQGVGFS
                : :**:   * **  :*::*  ****::: ** :*:** *.  :  :**::. : .* . 

AT3G49950.1     EDAVADVKAMLEEHAVGWGMKKEDDDESLVLTWKGHSVVFATVWVPI-------------
gm034198_Glyma1 DETVREIKGLLDEHASGWGMKRE--EGMLVLTWKGNSCVFATAWVPCEMRDHIGIDAGLS
gm047288_Glyma1 EDSVAEVKAMLDEHAAGWGLKKE--DEHIVLTWKGHNVVFASA-----------------
                :::* ::*.:*:*** ***:*:*  :  :******:. ***:.
BoxShade v3.31 C (beta, 970507) Output
AT3G49950.1     - - - - - - - - - - - - - - - - M T K T R I L N P T R F - - - - P - - - - - - S P K P L R G C G D A N F M E Q L L L H C
gm034198_Glyma1    M H V T S S Q S H M K A E L K G T T S I S F Q N P T T T L F N N P L S G - - - A L K G C L G S L D G A C I E K L L L H C
gm047288_Glyma1    - - - - - - - - - - - - - - - - M N K N Q I P R P R P W - - - - P A S G F P T T S K A L S N L G N A N C M E Q L L V H C
 
AT3G49950.1     A T A I D S N D A A L T H Q I L W V L N N I A P P D G D S T Q R L T S A F L R A L L S R A V S K T P T L S S T I S F L P
gm034198_Glyma1    A S A L E S N D V T L A Q Q V M W V L N N V A S P V G D T N Q R L T S W F L R A L I S R A - - - S R I C P T A M S F K G
gm047288_Glyma1    A N A I E T N D V T L A Q Q I L W V L N N I A P H D G D S N Q R L A S G F L R A L T A R A - A K T G T C K M L V S A G T
 
AT3G49950.1     Q A D - E L H R F S V V E L A A F V D L T P W H R F G F I A A N A A I L T A V E G Y S T V H I V D L S L T H C M Q I P T
gm034198_Glyma1    S N T I Q R R L M S V T E L A G Y V D L I P W H R F G Y C A S N N E I Y K A I T G F Q R V H I V D F S I T H C M Q W P T
gm047288_Glyma1    N L S I D T H R F N I I E L A N F V D L T P W H R F G F T A A N A A V L E A T E G F S V V H I V D L S L T H C M Q I P T
 
AT3G49950.1     L I D A M A S R L - - N K P P P L L K L T V V S S - - S D H F P P F I N I S Y E E L G S K L V N F A T T R N I T M E F T
gm034198_Glyma1    F I D A L A K R - - - P E G P P S L R I T V P S C - - R P H V P P L V N I S I H E V G L R L G N F A K F R D V P F E F N
gm047288_Glyma1    L V D A I A S R Q H H D A P P P I I K L T V A D A C C R D H I P P M L D L S Y E E L G A K L V S F A R S R N V I M E F R
 
AT3G49950.1     I V P S T - - - - - - - Y S D - - - - - G F S S L L Q Q L R I Y P S S F N - - - - E A L V V N C H M M L R Y I P E E P -
gm034198_Glyma1    V I G N T G P L T T A E L S D E S T N F H F E A M L S L L - - N P T M L N L R E D E A L V I N C Q N W L R Y L S D D R K
gm047288_Glyma1    V V S S S - - - - - - - Y Q D - - - - - G F A T - - - - - - - E P S T P S - - - - E A L V I N C H M M L H Y I P D E T -
 
AT3G49950.1     - L T S S S S S L R T V F - - - - - L K Q L R S L N P R I V T L I E E D V D L T S E N L V N R L K S A F N Y F W I P F D
gm034198_Glyma1    G I S R Q S L S L R D A F - - - - - L N I I K G L N P R I V L L V D E D C D L S A S S L T S R I T T C F N H M W I P F D
gm047288_Glyma1    - L S D T T D L T S Y V Y D S S S S A A S L R G L D P T V V I L V D E D A D L T S N N L V C R L R S A F N F L W I P Y D
 
AT3G49950.1     T T D T F M - - - S E Q R R W Y E A E I S W K I E N V V A K E G A E R V E R T E T K R R W I E R M R E A E F G G V R V K
gm034198_Glyma1    A L E T F L P K D S C Q R S E F E S D I G Q K I E N I I S Y E G H Q R I E R S E S G V Q M S Q R M K N V G Y L S V P F C
gm047288_Glyma1    T V D T F L P R G S K Q R Q W Y E A D I C W K I E N V I A H E G L Q R V E R V E P K N K W E E R M K N A S F Q G V G F S
 
AT3G49950.1     E D A V A D V K A M L E E H A V G W G M K K E D D D E S L V L T W K G H S V V F A T V W V P I - - - - - - - - - - - - -
gm034198_Glyma1    D E T V R E I K G L L D E H A S G W G M K R E - - E G M L V L T W K G N S C V F A T A W V P C E M R D H I G I D A G L S
gm047288_Glyma1    E D S V A E V K A M L D E H A A G W G L K K E - - D E H I V L T W K G H N V V F A S A - - - - - - - - - - - - - - - - -
 
0