fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50060.1 EDPPTSLSLSLPGAEN at 203/301 in AT3G50060.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt037616 NDPPTSLSLSLPGADS in 213/330 AT4G37260.1 1st_not 0.489406779 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G50060.1     MA------DRVKGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWCNQLSP
pt037616_POPTR_ MAITRKEMDRIKGPWSPEEDEALQKLVQKHGARNWSLISKSIPGRSGKSCRLRWCNQLSP
                **      **:***** **** *:::*:*:*.**** ***********************

AT3G50060.1     EVEHRPFSPEEDETIVTARAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCSGGVAVT
pt037616_POPTR_ QVEHRPFTPDEDDTIIRAHARFGNKWATIARLLYGRTDNAIKNHWNSTLKRKCSSMAEDG
                :******:*:**:**: *:*:************ ******:*************. .   

AT3G50060.1     TVTETE-------EDQDRPKKRRSVSFDSAFAPVDTGLYMSPESPNGIDVSDSSTIPSPS
pt037616_POPTR_ NFCNREGYDGNLDGDNTQPLK-RSVSAGSG-VPVSTGLYMSPGSPSGSDVSDSSLPGLSS
                .. : *        *: :* * **** .*. .**.******* **.* ******    .*

AT3G50060.1     SPVAQLFKPMPISGGFTVVPQPLPVEMSSSSE---DPPTSLSLSLPGAENTSSSH-----
pt037616_POPTR_ SYNYNIYRPVARTGA--VMP---PVETTSSSDNNNDPPTSLSLSLPGADSSEVSNQVGEP
                *   ::::*:. :*.  *:*   *** :***:   *************:.:. *:     

AT3G50060.1     -----NNNNNALMFPRFESQMKINVEERG-EGRRG---EFMTVVQEMIKAEVRSYMAEMQ
pt037616_POPTR_ SQLPKSNTVTPLLTGRNAPAQEVSPAVGGLSGSVGFNTEFMSVMQEMIRKEVRNYMMEHS
                     .*. ..*:  *  .  ::.    * .*  *   ***:*:****: ***.** * .

AT3G50060.1     KTSGGFVVGGLYESGGNGGFRD------CGVITPKVE----
pt037616_POPTR_ GVGGGMC----YQGMSGEGFRNVAVNNRVGLVKLSSEKWTG
                 ..**:     *:. .. ***:       *::. . *
BoxShade v3.31 C (beta, 970507) Output
AT3G50060.1     M A - - - - - - D R V K G P W S Q E E D E Q L R R M V E K Y G P R N W S A I S K S I P G R S G K S C R L R W C N Q L S P
pt037616_POPTR_    M A I T R K E M D R I K G P W S P E E D E A L Q K L V Q K H G A R N W S L I S K S I P G R S G K S C R L R W C N Q L S P
 
AT3G50060.1     E V E H R P F S P E E D E T I V T A R A Q F G N K W A T I A R L L N G R T D N A V K N H W N S T L K R K C S G G V A V T
pt037616_POPTR_    Q V E H R P F T P D E D D T I I R A H A R F G N K W A T I A R L L Y G R T D N A I K N H W N S T L K R K C S S M A E D G
 
AT3G50060.1     T V T E T E - - - - - - - E D Q D R P K K R R S V S F D S A F A P V D T G L Y M S P E S P N G I D V S D S S T I P S P S
pt037616_POPTR_    N F C N R E G Y D G N L D G D N T Q P L K - R S V S A G S G - V P V S T G L Y M S P G S P S G S D V S D S S L P G L S S
 
AT3G50060.1     S P V A Q L F K P M P I S G G F T V V P Q P L P V E M S S S S E - - - D P P T S L S L S L P G A E N T S S S H - - - - -
pt037616_POPTR_    S Y N Y N I Y R P V A R T G A - - V M P - - - P V E T T S S S D N N N D P P T S L S L S L P G A D S S E V S N Q V G E P
 
AT3G50060.1     - - - - - N N N N N A L M F P R F E S Q M K I N V E E R G - E G R R G - - - E F M T V V Q E M I K A E V R S Y M A E M Q
pt037616_POPTR_    S Q L P K S N T V T P L L T G R N A P A Q E V S P A V G G L S G S V G F N T E F M S V M Q E M I R K E V R N Y M M E H S
 
AT3G50060.1     K T S G G F V V G G L Y E S G G N G G F R D - - - - - - C G V I T P K V E - - - -
pt037616_POPTR_    G V G G G M C - - - - Y Q G M S G E G F R N V A V N N R V G L V K L S S E K W T G
 
0