fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50060.1 EDPPTSLSLSLPGAEN at 203/301 in AT3G50060.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt000862 not found in 351aa AT4G37260.1 not_not 0.466101694 III
Pt016180 VDPPTSLSLSLPGSIT in 195/311 AT5G67300.1 not_not 0.444915254 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G50060.1     MA------DRVKGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWCNQLSP
pt000862_POPTR_ MATTRKEMDRIKGPWSPEEDEALKKLVQRHGPRNWSLISKSIPGRSGKSCRLRWCNQLSP
pt016180_POPTR_ MASSRKDVDRIKGPWSPEEDEALQRLVQTYGPRNWSLISKSIPGRSGKSCRLRWCNQLSP
                **      **:***** **** *:::*: :****** ***********************

AT3G50060.1     EVEHRPFSPEEDETIVTARAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCSGGVAVT
pt000862_POPTR_ QVEHRAFTPEEDDRIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSSMADDG
pt016180_POPTR_ EVEHRPFSAEEDDTIIRAHARIGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSSMFDDL
                :****.*:.***: *: *:*::******************:*************.     

AT3G50060.1     TVTETE--------EDQDRPKKRRSVSFDSAFAPVDTGLYMSPESPNGIDVSDSSTIPSP
pt000862_POPTR_ NLSNLEGYDGNLDVDDT--QPSKRSVSAGSGV-PLSTGLYMSPGSPSGSDVSDSS-PPGL
pt016180_POPTR_ N-------------DDAQQQPLKRSASLGAG-----SGLHLNPSSPSGSDLSDSS-IPGV
                .             :*      :**.* .:.     :**::.* **.* *:****  *. 

AT3G50060.1     SSP-VAQLFKPMPISGGFTVVPQPLPVEMSSSS----EDPPTSLSLSLPGAENTS--SSH
pt000862_POPTR_ SSAHNHNIYRPVARTGG--VLPP---VETASSSDNNDDDPPTLLSLSLPGA------DPA
pt016180_POPTR_ NSS---PVFRPPVKTAS--LVPPSLSIDVSSPT----VDPPTSLSLSLPGSITCQAPGSG
                .*.    :::*   :..  ::*    :: :*.:     **** *******:      .. 

AT3G50060.1     NNNNNALMFPRF---------ESQMKINVEER----------------------------
pt000862_POPTR_ TKLPNRVVEPTH--ERVAGSTQERVAGSTKERVAGSTQEPKPNTVTSFLVAADPAQVTTP
pt016180_POPTR_ SSSGSHVVNPTPMVQTPAAPPQAAVAVQQQEQV-------------SFL-----------
                ..  . :: *           :  :  . :*:                            

AT3G50060.1     ----GEGRRG----------EFMTVVQEMIKAEVRSYMAEMQKTSGGFVVGGLYESGGNG
pt000862_POPTR_ VVAGQTGRPGCGFVG--LSRELMTVMQEMIRREVRNYMMEQSG--GGMCYQGM----SGE
pt016180_POPTR_ ----QQKNPGSRLENQFFSAEFLAVMQEMIRKEVRNYMSGIEQ--NGLC---L----GTE
                       . *          *:::*:****: ***.**   .   .*:    :    .  

AT3G50060.1     GFRDCGVI---TPKVE
pt000862_POPTR_ GFRNVAVNRVGVGKIE
pt016180_POPTR_ AIRNAVVKRIGISRIE
                .:*:  *      ::*
BoxShade v3.31 C (beta, 970507) Output
AT3G50060.1     M A - - - - - - D R V K G P W S Q E E D E Q L R R M V E K Y G P R N W S A I S K S I P G R S G K S C R L R W C N Q L S P
pt000862_POPTR_    M A T T R K E M D R I K G P W S P E E D E A L K K L V Q R H G P R N W S L I S K S I P G R S G K S C R L R W C N Q L S P
pt016180_POPTR_    M A S S R K D V D R I K G P W S P E E D E A L Q R L V Q T Y G P R N W S L I S K S I P G R S G K S C R L R W C N Q L S P
 
AT3G50060.1     E V E H R P F S P E E D E T I V T A R A Q F G N K W A T I A R L L N G R T D N A V K N H W N S T L K R K C S G G V A V T
pt000862_POPTR_    Q V E H R A F T P E E D D R I I R A H A R F G N K W A T I A R L L N G R T D N A I K N H W N S T L K R K C S S M A D D G
pt016180_POPTR_    E V E H R P F S A E E D D T I I R A H A R I G N K W A T I A R L L N G R T D N A I K N H W N S T L K R K C S S M F D D L
 
AT3G50060.1     T V T E T E - - - - - - - - E D Q D R P K K R R S V S F D S A F A P V D T G L Y M S P E S P N G I D V S D S S T I P S P
pt000862_POPTR_    N L S N L E G Y D G N L D V D D T - - Q P S K R S V S A G S G V - P L S T G L Y M S P G S P S G S D V S D S S - P P G L
pt016180_POPTR_    N - - - - - - - - - - - - - D D A Q Q Q P L K R S A S L G A G - - - - - S G L H L N P S S P S G S D L S D S S - I P G V
 
AT3G50060.1     S S P - V A Q L F K P M P I S G G F T V V P Q P L P V E M S S S S - - - - E D P P T S L S L S L P G A E N T S - - S S H
pt000862_POPTR_    S S A H N H N I Y R P V A R T G G - - V L P P - - - V E T A S S S D N N D D D P P T L L S L S L P G A - - - - - - D P A
pt016180_POPTR_    N S S - - - P V F R P P V K T A S - - L V P P S L S I D V S S P T - - - - V D P P T S L S L S L P G S I T C Q A P G S G
 
AT3G50060.1     N N N N N A L M F P R F - - - - - - - - - E S Q M K I N V E E R - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt000862_POPTR_    T K L P N R V V E P T H - - E R V A G S T Q E R V A G S T K E R V A G S T Q E P K P N T V T S F L V A A D P A Q V T T P
pt016180_POPTR_    S S S G S H V V N P T P M V Q T P A A P P Q A A V A V Q Q Q E Q V - - - - - - - - - - - - - S F L - - - - - - - - - - -
 
AT3G50060.1     - - - - G E G R R G - - - - - - - - - - E F M T V V Q E M I K A E V R S Y M A E M Q K T S G G F V V G G L Y E S G G N G
pt000862_POPTR_    V V A G Q T G R P G C G F V G - - L S R E L M T V M Q E M I R R E V R N Y M M E Q S G - - G G M C Y Q G M - - - - S G E
pt016180_POPTR_    - - - - Q Q K N P G S R L E N Q F F S A E F L A V M Q E M I R K E V R N Y M S G I E Q - - N G L C - - - L - - - - G T E
 
AT3G50060.1     G F R D C G V I - - - T P K V E
pt000862_POPTR_    G F R N V A V N R V G V G K I E
pt016180_POPTR_    A I R N A V V K R I G I S R I E
 
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