fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50060.1 EDPPTSLSLSLPGAEN at 203/301 in AT3G50060.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os032654 PPPATSLSLSLSLPGL in 204/319 AT5G67300.1 1st_not 0.411016949 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G50060.1     -MA----------DRVKGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWC
Os032654_Os09t0 MMASCRRGGGGDVDRIKGPWSPEEDEALQRLVGRHGARNWSLISKSIPGRSGKSCRLRWC
                 **          **:***** **** *:*:* ::*.**** ******************

AT3G50060.1     NQLSPEVEHRPFSPEEDETIVTARAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCSG
Os032654_Os09t0 NQLSPQVEHRPFTPEEDDTILRAHARFGNKWATIARLLAGRTDNAIKNHWNSTLKRKHHS
                *****:******:****:**: *:*:************ ******:***********  .

AT3G50060.1     GVAVTTVTETEEDQDRPKKRRSV----SFDSAFAPVDTGLYMSPESPNGIDVSDSS--TI
Os032654_Os09t0 SLLA--------DDLRPLKRTTSDGHPTLSSAAA---------PGSPSGSDLSDSSHHSL
                .: .        *: ** ** :     ::.** *         * **.* *:****  ::

AT3G50060.1     PS--PSSP-----VAQLFKPMPISGGFTVVPQPLPVEMSSSSEDPPT---SLSLSLPGAE
Os032654_Os09t0 PSQMPSSPPHLLLPQHVYRPVARAGGVVVPPPPPP--------PPPATSLSLSLSLPGLD
                **  ****       ::::*:. :**..* * * *         **:   ******** :

AT3G50060.1     NTSSSHNNNNN----------ALMFPRFES-------QMKINVEERGEGR-----RGEFM
Os032654_Os09t0 HPHPDPSTPSEPAVQLQPPPPSQMPPPTPSCVRQEPPQMPFQLQPPPPPRPSAPFSAEFL
                :. .. .. .:          : * *   *       ** ::::     *      .**:

AT3G50060.1     TVVQEMIKAEVRSYMAEMQKTSGGFVVGGLYESGGNGGFRDCGVI--TPKVE
Os032654_Os09t0 AMMQEMIRIEVRNYM------SGSAAVDP--RSSPDNGVRAASRIMGMAKIE
                :::****: ***.**      **. .*.   .*. :.*.* .. *   .*:*
BoxShade v3.31 C (beta, 970507) Output
AT3G50060.1     - M A - - - - - - - - - - D R V K G P W S Q E E D E Q L R R M V E K Y G P R N W S A I S K S I P G R S G K S C R L R W C
Os032654_Os09t0    M M A S C R R G G G G D V D R I K G P W S P E E D E A L Q R L V G R H G A R N W S L I S K S I P G R S G K S C R L R W C
 
AT3G50060.1     N Q L S P E V E H R P F S P E E D E T I V T A R A Q F G N K W A T I A R L L N G R T D N A V K N H W N S T L K R K C S G
Os032654_Os09t0    N Q L S P Q V E H R P F T P E E D D T I L R A H A R F G N K W A T I A R L L A G R T D N A I K N H W N S T L K R K H H S
 
AT3G50060.1     G V A V T T V T E T E E D Q D R P K K R R S V - - - - S F D S A F A P V D T G L Y M S P E S P N G I D V S D S S - - T I
Os032654_Os09t0    S L L A - - - - - - - - D D L R P L K R T T S D G H P T L S S A A A - - - - - - - - - P G S P S G S D L S D S S H H S L
 
AT3G50060.1     P S - - P S S P - - - - - V A Q L F K P M P I S G G F T V V P Q P L P V E M S S S S E D P P T - - - S L S L S L P G A E
Os032654_Os09t0    P S Q M P S S P P H L L L P Q H V Y R P V A R A G G V V V P P P P P P - - - - - - - - P P P A T S L S L S L S L P G L D
 
AT3G50060.1     N T S S S H N N N N N - - - - - - - - - - A L M F P R F E S - - - - - - - Q M K I N V E E R G E G R - - - - - R G E F M
Os032654_Os09t0    H P H P D P S T P S E P A V Q L Q P P P P S Q M P P P T P S C V R Q E P P Q M P F Q L Q P P P P P R P S A P F S A E F L
 
AT3G50060.1     T V V Q E M I K A E V R S Y M A E M Q K T S G G F V V G G L Y E S G G N G G F R D C G V I - - T P K V E
Os032654_Os09t0    A M M Q E M I R I E V R N Y M - - - - - - S G S A A V D P - - R S S P D N G V R A A S R I M G M A K I E
 
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