fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50060.1 EDPPTSLSLSLPGAEN at 203/301 in AT3G50060.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb023051 not found in 611aa AT4G37260.1 1st_not 0.427966101 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G50060.1     ---MADRVKGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPE-V
Sb023051_Sorbi1 GGRGPD--QGP------------LEPRGGRG--------PAAAGGPPR-------RPQLV
                    .*  :**            :*  * *.        *. :* . *        *: *

AT3G50060.1     EHRPFSPEEDETIV------------------------------TARAQFGNKWATIARL
Sb023051_Sorbi1 THQPLHPGSLRQVVPPPVVQPAVAAGGAPPLHARGGRHHPPRARKVRQQVGHHRAPPLRP
                 *:*: * . . :*                              ..* *.*:: *.  * 

AT3G50060.1     LNGRTDNAVKNHWNSTL-----------KRKCSGGVAVTTVTETEEDQDR--------PK
Sb023051_Sorbi1 HRQRHQEPLELHAQAQVLRRFRRRRRCGKRRCSG---CRRRAPAQAHQQRRTPGALLQPR
                 . * ::.:: * :: :           **:***       : :: .*:*        *:

AT3G50060.1     K---------------------------RRSVSFDSAFA--PVDTGLYMSPESPNGIDVS
Sb023051_Sorbi1 KPVRVRPQRLQPPQPSLRHAVSRFCCRCRRHLPAAAAAARVPPRAARGRRGRAPGGAASC
                *                           ** :.  :* *  *  :.     .:*.*   .

AT3G50060.1     DSSTIPSPSSPVAQLFKPMPISGGFTVVPQPLPVEMSSSSEDPPT--SLSLSLPGAENTS
Sb023051_Sorbi1 AAAAFSSSSSSAAA-----AAASGDLLVAVPLPARAGPAARTIPSDGTASTSCTDTSASG
                 ::::.*.**..*      . :.*  :*. ***.. ..::.  *:  : * * ..:. :.

AT3G50060.1     SSHNNNNNALMFPRFES-------------------------QMKINVEERGEG-RRGEF
Sb023051_Sorbi1 SSSSDAAAAATSPT-ESEVAVPAAAGAGDEPHVAAAGGSSAVQLGVPADDAGDDPDRGPE
                ** .:   *   *  **                         *: : .:: *:.  **  

AT3G50060.1     MTVVQEMIKAEVRSYMAEMQKTSGGF----VVGG-----LYESGGN-----GGFRDCGVI
Sb023051_Sorbi1 LHVRVGLRPARRRRLRARRDQAHDGHGQDRVVSADSSSRRPRSGRNRRSIRGGHR---VY
                : *   :  *. *   *. ::: .*.    **..       .** *     **.*   * 

AT3G50060.1     TPKVE-----------------
Sb023051_Sorbi1 EPRTACTNQTEAVPCRAVRCGK
                 *:.
BoxShade v3.31 C (beta, 970507) Output
AT3G50060.1     - - - M A D R V K G P W S Q E E D E Q L R R M V E K Y G P R N W S A I S K S I P G R S G K S C R L R W C N Q L S P E - V
Sb023051_Sorbi1    G G R G P D - - Q G P - - - - - - - - - - - - L E P R G G R G - - - - - - - - P A A A G G P P R - - - - - - - R P Q L V
 
AT3G50060.1     E H R P F S P E E D E T I V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T A R A Q F G N K W A T I A R L
Sb023051_Sorbi1    T H Q P L H P G S L R Q V V P P P V V Q P A V A A G G A P P L H A R G G R H H P P R A R K V R Q Q V G H H R A P P L R P
 
AT3G50060.1     L N G R T D N A V K N H W N S T L - - - - - - - - - - - K R K C S G G V A V T T V T E T E E D Q D R - - - - - - - - P K
Sb023051_Sorbi1    H R Q R H Q E P L E L H A Q A Q V L R R F R R R R R C G K R R C S G - - - C R R R A P A Q A H Q Q R R T P G A L L Q P R
 
AT3G50060.1     K - - - - - - - - - - - - - - - - - - - - - - - - - - - R R S V S F D S A F A - - P V D T G L Y M S P E S P N G I D V S
Sb023051_Sorbi1    K P V R V R P Q R L Q P P Q P S L R H A V S R F C C R C R R H L P A A A A A A R V P P R A A R G R R G R A P G G A A S C
 
AT3G50060.1     D S S T I P S P S S P V A Q L F K P M P I S G G F T V V P Q P L P V E M S S S S E D P P T - - S L S L S L P G A E N T S
Sb023051_Sorbi1    A A A A F S S S S S S A A A - - - - - A A A S G D L L V A V P L P A R A G P A A R T I P S D G T A S T S C T D T S A S G
 
AT3G50060.1     S S H N N N N N A L M F P R F E S - - - - - - - - - - - - - - - - - - - - - - - - - Q M K I N V E E R G E G - R R G E F
Sb023051_Sorbi1    S S S S D A A A A A T S P T - E S E V A V P A A A G A G D E P H V A A A G G S S A V Q L G V P A D D A G D D P D R G P E
 
AT3G50060.1     M T V V Q E M I K A E V R S Y M A E M Q K T S G G F - - - - V V G G - - - - - L Y E S G G N - - - - - G G F R D C G V I
Sb023051_Sorbi1    L H V R V G L R P A R R R R L R A R R D Q A H D G H G Q D R V V S A D S S S R R P R S G R N R R S I R G G H R - - - V Y
 
AT3G50060.1     T P K V E - - - - - - - - - - - - - - - - -
Sb023051_Sorbi1    E P R T A C T N Q T E A V P C R A V R C G K
 
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