fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50060.1 EDPPTSLSLSLPGAEN at 203/301 in AT3G50060.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb026904 EDPLTSLSLSLPGLDH in 254/495 AT5G67300.1 not_not 0.402542372 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G50060.1     MADRVKGPWSQEEDEQL-RRMVEKYGPRNWSAISKSIP--GRSGKSCRLRWCNQLSPEVE
Sb026904_Sorbi1 ------PPIETSQSSRANRNLISSH-----TAIASAIAIGGTSSSS-------------N
                       * . .:..:  *.::..:     :**:.:*.  * *..*             :

AT3G50060.1     HRPFSPEEDETIVTARAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCSGGVAVTTVT
Sb026904_Sorbi1 SRPIHPVPC-SCVSGSQQYGSG------VVGVRQDKG------AVEPRGGRGAAAARGAP
                 **: *    : *:.  *:*.       ::. * *:.      :.  *   *..*.  ..

AT3G50060.1     ETEE-DQDRPKKRRSVSFDSAFAPV--------------------DTGLYMSPESPNGID
Sb026904_Sorbi1 RRAELDGDRARDPGPVG-EVVPAPVVQPAVPAGGAPPLHARGGRRDPGRARAPGKPLGRD
                .  * * **.:.  .*. : . ***                    *.*   :* .* * *

AT3G50060.1     VSDSSTIPSPSSP-----------VAQL---FKPMPISGGF-------------------
Sb026904_Sorbi1 RA------PPSRPHRQRRQEPLELVAQAEARHRHLQRRGGYRRPRGAAVQAREPCWPREP
                 :      .** *           ***    .: :   **:                   

AT3G50060.1     ----TVVPQP-------------------------------LPVEMSS------------
Sb026904_Sorbi1 DGVGSQRPQPRLRRRRAGVPPRPARRRLRRHQLHRRRAPSSAPASSSSRRLRGPAHLALA
                    :  ***                                *.. **            

AT3G50060.1     ------------------SSEDPPTSLSLSLPGAENTSSSHNNNNNALMFPRFESQ----
Sb026904_Sorbi1 FAAGAGPPVGVVGVPPRQRAEPLPGAVPLALPVAAVYSSTRR--------PSFAAGGGGS
                                   :*  * ::.*:** *   **::.        * * :     

AT3G50060.1     -------MKINVEERGEGR-------RGEFMTVVQEMIKAEVRSYMAEMQKTSGGFVVGG
Sb026904_Sorbi1 LSVVVVVVVVPVQRRAGGRDAGDDPCRGAQVHVR----RGPTRRLRSRRRRRGGHAAAGG
                       : : *:.*. **       **  : *     :. .*   :. :: .*  ..**

AT3G50060.1     LYESGGNGGFRDCGVI----TPKVE--------------
Sb026904_Sorbi1 GRHARRRGARRRRHTAVEEENPKPNQTKSDRINAKHCVN
                  .:  .*. *   .     .** :
BoxShade v3.31 C (beta, 970507) Output
AT3G50060.1     M A D R V K G P W S Q E E D E Q L - R R M V E K Y G P R N W S A I S K S I P - - G R S G K S C R L R W C N Q L S P E V E
Sb026904_Sorbi1    - - - - - - P P I E T S Q S S R A N R N L I S S H - - - - - T A I A S A I A I G G T S S S S - - - - - - - - - - - - - N
 
AT3G50060.1     H R P F S P E E D E T I V T A R A Q F G N K W A T I A R L L N G R T D N A V K N H W N S T L K R K C S G G V A V T T V T
Sb026904_Sorbi1    S R P I H P V P C - S C V S G S Q Q Y G S G - - - - - - V V G V R Q D K G - - - - - - A V E P R G G R G A A A A R G A P
 
AT3G50060.1     E T E E - D Q D R P K K R R S V S F D S A F A P V - - - - - - - - - - - - - - - - - - - - D T G L Y M S P E S P N G I D
Sb026904_Sorbi1    R R A E L D G D R A R D P G P V G - E V V P A P V V Q P A V P A G G A P P L H A R G G R R D P G R A R A P G K P L G R D
 
AT3G50060.1     V S D S S T I P S P S S P - - - - - - - - - - - V A Q L - - - F K P M P I S G G F - - - - - - - - - - - - - - - - - - -
Sb026904_Sorbi1    R A - - - - - - P P S R P H R Q R R Q E P L E L V A Q A E A R H R H L Q R R G G Y R R P R G A A V Q A R E P C W P R E P
 
AT3G50060.1     - - - - T V V P Q P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L P V E M S S - - - - - - - - - - - -
Sb026904_Sorbi1    D G V G S Q R P Q P R L R R R R A G V P P R P A R R R L R R H Q L H R R R A P S S A P A S S S S R R L R G P A H L A L A
 
AT3G50060.1     - - - - - - - - - - - - - - - - - - S S E D P P T S L S L S L P G A E N T S S S H N N N N N A L M F P R F E S Q - - - -
Sb026904_Sorbi1    F A A G A G P P V G V V G V P P R Q R A E P L P G A V P L A L P V A A V Y S S T R R - - - - - - - - P S F A A G G G G S
 
AT3G50060.1     - - - - - - - M K I N V E E R G E G R - - - - - - - R G E F M T V V Q E M I K A E V R S Y M A E M Q K T S G G F V V G G
Sb026904_Sorbi1    L S V V V V V V V V P V Q R R A G G R D A G D D P C R G A Q V H V R - - - - R G P T R R L R S R R R R R G G H A A A G G
 
AT3G50060.1     L Y E S G G N G G F R D C G V I - - - - T P K V E - - - - - - - - - - - - - -
Sb026904_Sorbi1    G R H A R R R G A R R R R H T A V E E E N P K P N Q T K S D R I N A K H C V N
 
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