fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50060.1 EDPPTSLSLSLPGAEN at 203/301 in AT3G50060.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm001934 NDPPTSLSLSLPGVDS in 254/368 AT5G67300.1 1st_not 0.483050847 II
Gm029895 NDPPTSLSLSLPGVGV in 188/297 AT5G67300.1 not_not 0.476694915 III
Gm011952 AGPATSLSLSLPGVES in 196/295 AT5G67300.1 not_not 0.447033898 III
Gm047970 CDPATSLSLSLPGFGS in 176/268 AT5G67300.1 not_not 0.421610169 III
Gm008871 not found in 265aa AT5G67300.1 not_not 0.419491525 III
Gm039420 PDPATSLSLSLPGFTV in 186/273 AT5G67300.1 not_not 0.413135593 III
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G50060.1     M-----------------------------------------------------------
gm039420_Glyma1 MVSSS-----------------------------------------------------GK
gm001934_Glyma0 MTAVSQIPSQPLPWKKRYRLPITLADKYKRANHSNAPHHYATGGASCFHFLSQKSLIMNT
gm008871_Glyma0 MAS---------------------------------------------------------
gm029895_Glyma1 ------------------------------------------------------------
gm011952_Glyma0 MIAVA-------------------------------------------------------
gm047970_Glyma1 ------------------------------------------------------------
                                                                            

AT3G50060.1     ---ADRVKGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPEVEH
gm039420_Glyma1 SREMDRVKGPWSPEEDEALRALVQAHGPRNWSVISKSIPGRSGKSCRLRWCNQLSPQVAH
gm001934_Glyma0 RKDMDRIKGPWSPEEDEALQKLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEH
gm008871_Glyma0 AKDMDRIKGPWSPEEDEALRRLVQTYGPRNWSVISKSIPGRSGKSCRLRWCNQLSPEVER
gm029895_Glyma1 ---MDRIKGPWSPEEDEALQKLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEH
gm011952_Glyma0 RKDMDRIKGPWSPEEDEALQKLVERHGPRNWSLISRSIPGRSGKSCRLRWCNQLSPQVEH
gm047970_Glyma1 ---MDRVKGPWSPEEDEALRRLVQAHGPRNWSVISKSVPGRSGKSCRLRWCNQLSPQVAH
                    **:***** **** *: :*: :****** **:*:******************:* :

AT3G50060.1     RPFSPEEDETIVTARAQFGNKWATIARLL-NGRTDNAVKNHWNSTLKRKCSGGVAVTTVT
gm039420_Glyma1 RPFSQEEDEAIIMAHAKFGNKWATIARLL-NGRTDNAVKNHWNSTLKRKS------SAVS
gm001934_Glyma0 RAFTHEEDDTIIRAHARFGNKWATIARLL-HGRTDNAIKNHWNSTLKRKCT-----STMI
gm008871_Glyma0 RPFTAEEDEAILKAHARFGNKWATIARFL-NGRTDNAIKNHWNSTLKRKCS-----EPLS
gm029895_Glyma1 RAFTAEEDDTIIRAHARFGNKWATIARLL-HGRTDNAIKNHWNSTLKRKCS-----STMI
gm011952_Glyma0 RAFTPEEDETIIRAHARFGNKWATIARLL-SGRTDNAIKNHWNSTLKRKCA-----SFMM
gm047970_Glyma1 RPFSPDEDEAIVRAHARFGNKWATIARLLNNGRTDNAVKNHWNSTLKRKKC-----SAVS
                *.*: :**::*: *:*:**********:*  ******:***********         : 

AT3G50060.1     ETEED--QDRPKKRRSVSFDSAFAPVDTGLY---MSPESPNGIDVSDSSTIPSPSSPVAQ
gm039420_Glyma1 DDDVV--THRQPLKRSNSVGPAH-----------LNPASPSVSDLSDPGLPALSNPSPSA
gm001934_Glyma0 DDDNT-----PPLKRSLSAGAAIP-VSTGLYMNPPTPGSPSGSDVSESS---VLVASSSH
gm008871_Glyma0 EP--------RPLKRSATVS-----------------GSQSGSDLSDSGLPIILARSVSV
gm029895_Glyma1 -DDNT-----QPLKRSVSAGAAIP-VSTGLYMNPPTPGSPSGSDVSESS---LPVASSSH
gm011952_Glyma0 AGDEAVAVSPRPLKRSFSAGAAV-----------PPPGSPSGSDFSESSAPGVVSVSPSH
gm047970_Glyma1 DD--V--TDRPPLKRSASVGPAH-----------LNPGSPSGSDLSDPSLPALSNPSPSA
                             :** : .                  * .  *.*:..       . : 

AT3G50060.1     LFKPMPISGGFTVVPQPLPVEMSS--SS-ED-----PPTSLSLSLPGAENTSSSHNNN--
gm039420_Glyma1 HYMPN-------------LMETAS--SA-PD-----PATSLSLSLPG---F---------
gm001934_Glyma0 VFRPVPRTG--AVLP---PVETTTTLSS-ND-----PPTSLSLSLPG---VDSSEVSN--
gm008871_Glyma0 TVAPSN--------H---LAETAS--SSVTD-----PATLLSLSLPG---FDSCDGAN--
gm029895_Glyma1 VFRPVPRTV--KVLP---PVETTS--SS-ND-----PPTSLSLSLPGVGVVDSSEVSN--
gm011952_Glyma0 VFRPVP------VRP---IVETAS--SQ-DDADDAGPATSLSLSLPG---VESAEISN--
gm047970_Glyma1 HYRPN-------------LMETAS--SA-CD-----PATSLSLSLPG---FGS--GSNPV
                   *                * ::  *   *     *.* *******             

AT3G50060.1     ---------------------NNALMFPRFES-QMKINVEERGEGRR---GEFMTVVQEM
gm039420_Glyma1 TVPQP--VSPPPPPLP----------LPAETV-------EERG--KQMFNAEFLRVMQEM
gm001934_Glyma0 RTTEPIHAAPPPPPQPQPQPLNTIPLLPMMTV----PSVSPTGMAPFNFSAEFLAVMQEM
gm008871_Glyma0 NGPGP--NQGPSCG-------------PFQEI-------PMLGSQKQLFSQEFMKVMQEM
gm029895_Glyma1 RTTEPIHFTPPMPHRS-----NTMPLLPMMT------SVSATVMAPFNFSAEFRSVMQEM
gm011952_Glyma0 RAT-------------------TVPVMPVNTVAAPAPVPAEVGLGALNLSGEFMAVMHEM
gm047970_Glyma1 CAPRPVSVSPPSPP-------------PAEPV-------EQRG--KQMFNAEFLRVMQEM
                                           *                       **  *::**

AT3G50060.1     IKAEVRSYMAEM-QKTSGGFVVGG--LYESGGNGGFRDCGVITPKVE-
gm039420_Glyma1 IKKEVRSYMSGMEEQKNG-FRMQT----EAIGNAVVKRMGI--SNIE-
gm001934_Glyma0 IRKEVRSYMELH-NQKNG-MCFQA-AVNDGFRNASVKRIGI--SRVDS
gm008871_Glyma0 IRVEVRNYMSVL--ERNG-VCMQT----DAIRNSVLERMGI--GRVE-
gm029895_Glyma1 IRKEVRSYIELH-NQ-NG-MCFQA-AVNDGFRNASVKRIGI--SRVDS
gm011952_Glyma0 IRKEVRSYME---QQKNGMMCFQGMEMMEGFRNVSVKRIGI--SRVDS
gm047970_Glyma1 IRKEVRSYMSGM-EQKNG-FRIPT----EAIGNAVVKRMGI--SNIE-
                *: ***.*:     : .* . .      :.  *  ..  *:   .::
BoxShade v3.31 C (beta, 970507) Output
AT3G50060.1     M - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm039420_Glyma1    M V S S S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G K
gm001934_Glyma0    M T A V S Q I P S Q P L P W K K R Y R L P I T L A D K Y K R A N H S N A P H H Y A T G G A S C F H F L S Q K S L I M N T
gm008871_Glyma0    M A S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm029895_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm011952_Glyma0    M I A V A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm047970_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G50060.1     - - - A D R V K G P W S Q E E D E Q L R R M V E K Y G P R N W S A I S K S I P G R S G K S C R L R W C N Q L S P E V E H
gm039420_Glyma1    S R E M D R V K G P W S P E E D E A L R A L V Q A H G P R N W S V I S K S I P G R S G K S C R L R W C N Q L S P Q V A H
gm001934_Glyma0    R K D M D R I K G P W S P E E D E A L Q K L V E K H G P R N W S L I S K S I P G R S G K S C R L R W C N Q L S P Q V E H
gm008871_Glyma0    A K D M D R I K G P W S P E E D E A L R R L V Q T Y G P R N W S V I S K S I P G R S G K S C R L R W C N Q L S P E V E R
gm029895_Glyma1    - - - M D R I K G P W S P E E D E A L Q K L V E K H G P R N W S L I S K S I P G R S G K S C R L R W C N Q L S P Q V E H
gm011952_Glyma0    R K D M D R I K G P W S P E E D E A L Q K L V E R H G P R N W S L I S R S I P G R S G K S C R L R W C N Q L S P Q V E H
gm047970_Glyma1    - - - M D R V K G P W S P E E D E A L R R L V Q A H G P R N W S V I S K S V P G R S G K S C R L R W C N Q L S P Q V A H
 
AT3G50060.1     R P F S P E E D E T I V T A R A Q F G N K W A T I A R L L - N G R T D N A V K N H W N S T L K R K C S G G V A V T T V T
gm039420_Glyma1    R P F S Q E E D E A I I M A H A K F G N K W A T I A R L L - N G R T D N A V K N H W N S T L K R K S - - - - - - S A V S
gm001934_Glyma0    R A F T H E E D D T I I R A H A R F G N K W A T I A R L L - H G R T D N A I K N H W N S T L K R K C T - - - - - S T M I
gm008871_Glyma0    R P F T A E E D E A I L K A H A R F G N K W A T I A R F L - N G R T D N A I K N H W N S T L K R K C S - - - - - E P L S
gm029895_Glyma1    R A F T A E E D D T I I R A H A R F G N K W A T I A R L L - H G R T D N A I K N H W N S T L K R K C S - - - - - S T M I
gm011952_Glyma0    R A F T P E E D E T I I R A H A R F G N K W A T I A R L L - S G R T D N A I K N H W N S T L K R K C A - - - - - S F M M
gm047970_Glyma1    R P F S P D E D E A I V R A H A R F G N K W A T I A R L L N N G R T D N A V K N H W N S T L K R K K C - - - - - S A V S
 
AT3G50060.1     E T E E D - - Q D R P K K R R S V S F D S A F A P V D T G L Y - - - M S P E S P N G I D V S D S S T I P S P S S P V A Q
gm039420_Glyma1    D D D V V - - T H R Q P L K R S N S V G P A H - - - - - - - - - - - L N P A S P S V S D L S D P G L P A L S N P S P S A
gm001934_Glyma0    D D D N T - - - - - P P L K R S L S A G A A I P - V S T G L Y M N P P T P G S P S G S D V S E S S - - - V L V A S S S H
gm008871_Glyma0    E P - - - - - - - - R P L K R S A T V S - - - - - - - - - - - - - - - - - G S Q S G S D L S D S G L P I I L A R S V S V
gm029895_Glyma1    - D D N T - - - - - Q P L K R S V S A G A A I P - V S T G L Y M N P P T P G S P S G S D V S E S S - - - L P V A S S S H
gm011952_Glyma0    A G D E A V A V S P R P L K R S F S A G A A V - - - - - - - - - - - P P P G S P S G S D F S E S S A P G V V S V S P S H
gm047970_Glyma1    D D - - V - - T D R P P L K R S A S V G P A H - - - - - - - - - - - L N P G S P S G S D L S D P S L P A L S N P S P S A
 
AT3G50060.1     L F K P M P I S G G F T V V P Q P L P V E M S S - - S S - E D - - - - - P P T S L S L S L P G A E N T S S S H N N N - -
gm039420_Glyma1    H Y M P N - - - - - - - - - - - - - L M E T A S - - S A - P D - - - - - P A T S L S L S L P G - - - F - - - - - - - - -
gm001934_Glyma0    V F R P V P R T G - - A V L P - - - P V E T T T T L S S - N D - - - - - P P T S L S L S L P G - - - V D S S E V S N - -
gm008871_Glyma0    T V A P S N - - - - - - - - H - - - L A E T A S - - S S V T D - - - - - P A T L L S L S L P G - - - F D S C D G A N - -
gm029895_Glyma1    V F R P V P R T V - - K V L P - - - P V E T T S - - S S - N D - - - - - P P T S L S L S L P G V G V V D S S E V S N - -
gm011952_Glyma0    V F R P V P - - - - - - V R P - - - I V E T A S - - S Q - D D A D D A G P A T S L S L S L P G - - - V E S A E I S N - -
gm047970_Glyma1    H Y R P N - - - - - - - - - - - - - L M E T A S - - S A - C D - - - - - P A T S L S L S L P G - - - F G S - - G S N P V
 
AT3G50060.1     - - - - - - - - - - - - - - - - - - - - - N N A L M F P R F E S - Q M K I N V E E R G E G R R - - - G E F M T V V Q E M
gm039420_Glyma1    T V P Q P - - V S P P P P P L P - - - - - - - - - - L P A E T V - - - - - - - E E R G - - K Q M F N A E F L R V M Q E M
gm001934_Glyma0    R T T E P I H A A P P P P P Q P Q P Q P L N T I P L L P M M T V - - - - P S V S P T G M A P F N F S A E F L A V M Q E M
gm008871_Glyma0    N G P G P - - N Q G P S C G - - - - - - - - - - - - - P F Q E I - - - - - - - P M L G S Q K Q L F S Q E F M K V M Q E M
gm029895_Glyma1    R T T E P I H F T P P M P H R S - - - - - N T M P L L P M M T - - - - - - S V S A T V M A P F N F S A E F R S V M Q E M
gm011952_Glyma0    R A T - - - - - - - - - - - - - - - - - - - T V P V M P V N T V A A P A P V P A E V G L G A L N L S G E F M A V M H E M
gm047970_Glyma1    C A P R P V S V S P P S P P - - - - - - - - - - - - - P A E P V - - - - - - - E Q R G - - K Q M F N A E F L R V M Q E M
 
AT3G50060.1     I K A E V R S Y M A E M - Q K T S G G F V V G G - - L Y E S G G N G G F R D C G V I T P K V E -
gm039420_Glyma1    I K K E V R S Y M S G M E E Q K N G - F R M Q T - - - - E A I G N A V V K R M G I - - S N I E -
gm001934_Glyma0    I R K E V R S Y M E L H - N Q K N G - M C F Q A - A V N D G F R N A S V K R I G I - - S R V D S
gm008871_Glyma0    I R V E V R N Y M S V L - - E R N G - V C M Q T - - - - D A I R N S V L E R M G I - - G R V E -
gm029895_Glyma1    I R K E V R S Y I E L H - N Q - N G - M C F Q A - A V N D G F R N A S V K R I G I - - S R V D S
gm011952_Glyma0    I R K E V R S Y M E - - - Q Q K N G M M C F Q G M E M M E G F R N V S V K R I G I - - S R V D S
gm047970_Glyma1    I R K E V R S Y M S G M - E Q K N G - F R I P T - - - - E A I G N A V V K R M G I - - S N I E -
 
0