fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os023742 not found in 184aa AT4G36900.1 1st_not 0.459363957 II
Sb033446 not found in 424aa AT2G23340.1 1st_not 0.459363957 II
Gm001918 not found in 168aa AT4G36900.1 1st_not 0.579505300 II
Pt036987 not found in 181aa AT5G67190.1 1st_not 0.561837455 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G50260.1     -MDA---------------------GVAVKADVAVK-------MKRERPFKGIRMRKWGK
pt036987_POPTR_ -MES---------------------GVDKDM--ATRKR---GGMESERQYKGIRMRKWGK
gm001918_Glyma0 -MESE--GRR--------------EGGERETTAATRKV---EG--AERRYKGIRMRKWGK
Os023742_Os06t0 -MDR----REATVFLPPPPPPQPTQPQQQPAAAAVRAPVGGRGGGGGRQYRGVRMRKWGK
Sb033446_Sorbi1 PHDHHHHPRRSGNKLLLPNQPGGWRGTPLPS--ARRR--------SPRRLPRFRCRPRRC
                  :                              * :           *    .* *    

AT3G50260.1     W----------------VAEIREPNK--------------------------RSRLWLGS
pt036987_POPTR_ W----------------VAEIREPNK--------------------------RSRIWLGS
gm001918_Glyma0 W----------------VAEIREPNK--------------------------RSRIWLGS
Os023742_Os06t0 W----------------VAEIREPNK--------------------------RSRIWLGS
Sb033446_Sorbi1 WAPVVERLRRRQGTAEAAAEVEEEEEEGGSIAAFGCASGASGWRRSASRTSGRGSGWVPT
                *                .**:.* ::                          *.  *: :

AT3G50260.1     -------------YSTPEAAARAYDTAVFYLRGPTATLNFPELL------PCTSAE----
pt036987_POPTR_ -------------YSTPVAAARAYDTAVFYLRGPSARLNFPEVLAAEGFGGGGSCG----
gm001918_Glyma0 -------------YSTPVAAARAYDTAVFYLRGPSARLNFPELLVREGPAALVAGC----
Os023742_Os06t0 -------------YSTAVAAARAYDTAVFYLRGRSARLNFPDQLDGAGGGGAGAGGAEDH
Sb033446_Sorbi1 PPPSPPRAPTTRPCSTSAAAPRGSTSPT----SSTAR-RWPITPRATGTAARGRGS----
                              **. **.*.  :..    . :*  .:*                   

AT3G50260.1     -DMSAATIRKKATEVGAQVDAIGATV----------------------VQNNKRRRVFSQ
pt036987_POPTR_ -DMSAASIRKRATEVGAHVDAIETALN-------------HHHHHHHHLHHDDRQRNSNN
gm001918_Glyma0 -DMSAASIRKKATEVGARVDALQATL------------------HHHYV--PPRQLLSGG
Os023742_Os06t0 RELTAAVIRKKAAEVGARVDAQHSVVGAAAPVPLQPPQPPP----------PQRRRTKNP
Sb033446_Sorbi1 RPPPSARRRPRSAPASTRSTAALALASLAAVLPLRSRCRPT-------IAAAPRTPTSTG
                   .:*  * ::: ..::  *  :                             *      

AT3G50260.1     KRDFGG--------------GLLELVDLNKLPDPENLDDDLVGK-
pt036987_POPTR_ SSSSNDNNET----VVDSRELKPRPVDLNKVPDPEDSDGDEWKRS
gm001918_Glyma0 GGGSGD--------------FPVRVVDLNKMPEPESSDC-EWDVN
Os023742_Os06t0 --------------------------DLNREPTPDTSDDE-----
Sb033446_Sorbi1 SPPRTPQTTSDFVVVLLLPHPSTTLLVLRQNYSPKG---------
                                           *.:   *.
BoxShade v3.31 C (beta, 970507) Output
AT3G50260.1     - M D A - - - - - - - - - - - - - - - - - - - - - G V A V K A D V A V K - - - - - - - M K R E R P F K G I R M R K W G K
pt036987_POPTR_    - M E S - - - - - - - - - - - - - - - - - - - - - G V D K D M - - A T R K R - - - G G M E S E R Q Y K G I R M R K W G K
gm001918_Glyma0    - M E S E - - G R R - - - - - - - - - - - - - - E G G E R E T T A A T R K V - - - E G - - A E R R Y K G I R M R K W G K
Os023742_Os06t0    - M D R - - - - R E A T V F L P P P P P P Q P T Q P Q Q Q P A A A A V R A P V G G R G G G G G R Q Y R G V R M R K W G K
Sb033446_Sorbi1    P H D H H H H P R R S G N K L L L P N Q P G G W R G T P L P S - - A R R R - - - - - - - - S P R R L P R F R C R P R R C
 
AT3G50260.1     W - - - - - - - - - - - - - - - - V A E I R E P N K - - - - - - - - - - - - - - - - - - - - - - - - - - R S R L W L G S
pt036987_POPTR_    W - - - - - - - - - - - - - - - - V A E I R E P N K - - - - - - - - - - - - - - - - - - - - - - - - - - R S R I W L G S
gm001918_Glyma0    W - - - - - - - - - - - - - - - - V A E I R E P N K - - - - - - - - - - - - - - - - - - - - - - - - - - R S R I W L G S
Os023742_Os06t0    W - - - - - - - - - - - - - - - - V A E I R E P N K - - - - - - - - - - - - - - - - - - - - - - - - - - R S R I W L G S
Sb033446_Sorbi1    W A P V V E R L R R R Q G T A E A A A E V E E E E E E G G S I A A F G C A S G A S G W R R S A S R T S G R G S G W V P T
 
AT3G50260.1     - - - - - - - - - - - - - Y S T P E A A A R A Y D T A V F Y L R G P T A T L N F P E L L - - - - - - P C T S A E - - - -
pt036987_POPTR_    - - - - - - - - - - - - - Y S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E V L A A E G F G G G G S C G - - - -
gm001918_Glyma0    - - - - - - - - - - - - - Y S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E L L V R E G P A A L V A G C - - - -
Os023742_Os06t0    - - - - - - - - - - - - - Y S T A V A A A R A Y D T A V F Y L R G R S A R L N F P D Q L D G A G G G G A G A G G A E D H
Sb033446_Sorbi1    P P P S P P R A P T T R P C S T S A A A P R G S T S P T - - - - S S T A R - R W P I T P R A T G T A A R G R G S - - - -
 
AT3G50260.1     - D M S A A T I R K K A T E V G A Q V D A I G A T V - - - - - - - - - - - - - - - - - - - - - - V Q N N K R R R V F S Q
pt036987_POPTR_    - D M S A A S I R K R A T E V G A H V D A I E T A L N - - - - - - - - - - - - - H H H H H H H H L H H D D R Q R N S N N
gm001918_Glyma0    - D M S A A S I R K K A T E V G A R V D A L Q A T L - - - - - - - - - - - - - - - - - - H H H Y V - - P P R Q L L S G G
Os023742_Os06t0    R E L T A A V I R K K A A E V G A R V D A Q H S V V G A A A P V P L Q P P Q P P P - - - - - - - - - - P Q R R R T K N P
Sb033446_Sorbi1    R P P P S A R R R P R S A P A S T R S T A A L A L A S L A A V L P L R S R C R P T - - - - - - - I A A A P R T P T S T G
 
AT3G50260.1     K R D F G G - - - - - - - - - - - - - - G L L E L V D L N K L P D P E N L D D D L V G K -
pt036987_POPTR_    S S S S N D N N E T - - - - V V D S R E L K P R P V D L N K V P D P E D S D G D E W K R S
gm001918_Glyma0    G G G S G D - - - - - - - - - - - - - - F P V R V V D L N K M P E P E S S D C - E W D V N
Os023742_Os06t0    - - - - - - - - - - - - - - - - - - - - - - - - - - D L N R E P T P D T S D D E - - - - -
Sb033446_Sorbi1    S P P R T P Q T T S D F V V V L L L P H P S T T L L V L R Q N Y S P K G - - - - - - - - -
 
0