fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt036987 not found in 181aa AT5G67190.1 1st_not 0.561837455 II
Pt001651 not found in 187aa AT5G67190.1 not_not 0.554770318 III
Pt016489 not found in 155aa AT1G46768.1 not_not 0.537102473 III
Pt038369 not found in 158aa AT1G46768.1 not_not 0.519434628 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G50260.1     MDAGV----------AVKADVAVK-----MKRERPFKGIRMRKWGKWVAEIREPNKRSRL
pt036987_POPTR_ MESG------------VDKDMATRKRG-GMESERQYKGIRMRKWGKWVAEIREPNKRSRI
pt038369_POPTR_ MEGECYTSPSASSSTPTISSIGKRKHGRQQNQEKPYRGIRMRKWGKWVAEIREPNKRSRI
pt016489_POPTR_ MEGGCCTSSTSTPSSTSTATTEKRKHSRQQNQEKPYRGIRMRKWGKWVAEIREPNKRSRI
pt001651_POPTR_ MESG------------VDKEMATRKRG-GMGSERQYKGIRMRKWGKWVAEIREPNKRSRI
                *:.                    :        *: ::**********************:

AT3G50260.1     WLGSYSTPEAAARAYDTAVFYLRGPTATLNFPELLPCT------SAEDMSAATIRKKATE
pt036987_POPTR_ WLGSYSTPVAAARAYDTAVFYLRGPSARLNFPEVLAAEGFGGGGSCGDMSAASIRKRATE
pt038369_POPTR_ WLGSYSTPIAAARAYDTAVFYLRGPSVRLNFPDLIHQED-----ELCDVSAASIRKKATE
pt016489_POPTR_ WLGSYSTPIAAARAYDTAVFYLRGPSARLNFPDLIYQED-----ELRDVSAASIRKKATE
pt001651_POPTR_ WLGSYSTPVAAARAYDTAVFYLRGPSARLNFPEFLAGENFSCGGSYGDMSAASIRKRATE
                ******** ****************:. ****:.:         .  *:***:***:***

AT3G50260.1     VGAQVDAIGATV---------VQNNKRRR---VFSQKRDFGGGLL---EL----VDLNKL
pt036987_POPTR_ VGAHVDAIETALNHHHHHHHHLHHDDRQRNSNNSSSSNDNNETVVDSRELKPRPVDLNKV
pt038369_POPTR_ VGAKVDALQTAL---------------------HASPGDNSPA---NRLLLSEKPDLNEY
pt016489_POPTR_ VGAKVDALQTAV---------------------HASPEDNS------RVLLSEKPDLNKF
pt001651_POPTR_ VGARVDAFETALNHHHHR----HHDDRQRNSSNSTSSNDNNETVVDSRELKSRPVDLNKV
                ***:***: :::                      :.  * .        *     ***: 

AT3G50260.1     PDPENLDDDLVGK-----------
pt036987_POPTR_ PDPEDSDGDEWKRS----------
pt038369_POPTR_ --PENCDEE---------------
pt016489_POPTR_ --PENSDEE---------------
pt001651_POPTR_ PDPEDSDGDEWERSLATGGNPMGC
                  **: * :
BoxShade v3.31 C (beta, 970507) Output
AT3G50260.1     M D A G V - - - - - - - - - - A V K A D V A V K - - - - - M K R E R P F K G I R M R K W G K W V A E I R E P N K R S R L
pt036987_POPTR_    M E S G - - - - - - - - - - - - V D K D M A T R K R G - G M E S E R Q Y K G I R M R K W G K W V A E I R E P N K R S R I
pt038369_POPTR_    M E G E C Y T S P S A S S S T P T I S S I G K R K H G R Q Q N Q E K P Y R G I R M R K W G K W V A E I R E P N K R S R I
pt016489_POPTR_    M E G G C C T S S T S T P S S T S T A T T E K R K H S R Q Q N Q E K P Y R G I R M R K W G K W V A E I R E P N K R S R I
pt001651_POPTR_    M E S G - - - - - - - - - - - - V D K E M A T R K R G - G M G S E R Q Y K G I R M R K W G K W V A E I R E P N K R S R I
 
AT3G50260.1     W L G S Y S T P E A A A R A Y D T A V F Y L R G P T A T L N F P E L L P C T - - - - - - S A E D M S A A T I R K K A T E
pt036987_POPTR_    W L G S Y S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E V L A A E G F G G G G S C G D M S A A S I R K R A T E
pt038369_POPTR_    W L G S Y S T P I A A A R A Y D T A V F Y L R G P S V R L N F P D L I H Q E D - - - - - E L C D V S A A S I R K K A T E
pt016489_POPTR_    W L G S Y S T P I A A A R A Y D T A V F Y L R G P S A R L N F P D L I Y Q E D - - - - - E L R D V S A A S I R K K A T E
pt001651_POPTR_    W L G S Y S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E F L A G E N F S C G G S Y G D M S A A S I R K R A T E
 
AT3G50260.1     V G A Q V D A I G A T V - - - - - - - - - V Q N N K R R R - - - V F S Q K R D F G G G L L - - - E L - - - - V D L N K L
pt036987_POPTR_    V G A H V D A I E T A L N H H H H H H H H L H H D D R Q R N S N N S S S S N D N N E T V V D S R E L K P R P V D L N K V
pt038369_POPTR_    V G A K V D A L Q T A L - - - - - - - - - - - - - - - - - - - - - H A S P G D N S P A - - - N R L L L S E K P D L N E Y
pt016489_POPTR_    V G A K V D A L Q T A V - - - - - - - - - - - - - - - - - - - - - H A S P E D N S - - - - - - R V L L S E K P D L N K F
pt001651_POPTR_    V G A R V D A F E T A L N H H H H R - - - - H H D D R Q R N S S N S T S S N D N N E T V V D S R E L K S R P V D L N K V
 
AT3G50260.1     P D P E N L D D D L V G K - - - - - - - - - - -
pt036987_POPTR_    P D P E D S D G D E W K R S - - - - - - - - - -
pt038369_POPTR_    - - P E N C D E E - - - - - - - - - - - - - - -
pt016489_POPTR_    - - P E N S D E E - - - - - - - - - - - - - - -
pt001651_POPTR_    P D P E D S D G D E W E R S L A T G G N P M G C
 
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