fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os023742 not found in 184aa AT4G36900.1 1st_not 0.459363957 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G50260.1     MD-----------------------AGVAVKADVAVK-MKRERPFKGIRMRKWGKWVAEI
Os023742_Os06t0 MDRREATVFLPPPPPPQPTQPQQQPAAAAVRAPVGGRGGGGGRQYRGVRMRKWGKWVAEI
                **                       *..**:* *. :     * ::*:************

AT3G50260.1     REPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLNFPELLP--------CTSAED-
Os023742_Os06t0 REPNKRSRIWLGSYSTAVAAARAYDTAVFYLRGRSARLNFPDQLDGAGGGGAGAGGAEDH
                ********:*******. *************** :* ****: *         . .*** 

AT3G50260.1     --MSAATIRKKATEVGAQVDA----IGATV---VQ-----NNKRRRVFSQKRDFGGGLLE
Os023742_Os06t0 RELTAAVIRKKAAEVGARVDAQHSVVGAAAPVPLQPPQPPPPQRRRTKNP----------
                  ::**.*****:****:***    :**:.   :*       :***. .           

AT3G50260.1     LVDLNKLPDPENLDDDLVGK
Os023742_Os06t0 --DLNREPTPDTSDDE----
                  ***: * *:. **:
BoxShade v3.31 C (beta, 970507) Output
AT3G50260.1     M D - - - - - - - - - - - - - - - - - - - - - - - A G V A V K A D V A V K - M K R E R P F K G I R M R K W G K W V A E I
Os023742_Os06t0    M D R R E A T V F L P P P P P P Q P T Q P Q Q Q P A A A A V R A P V G G R G G G G G R Q Y R G V R M R K W G K W V A E I
 
AT3G50260.1     R E P N K R S R L W L G S Y S T P E A A A R A Y D T A V F Y L R G P T A T L N F P E L L P - - - - - - - - C T S A E D -
Os023742_Os06t0    R E P N K R S R I W L G S Y S T A V A A A R A Y D T A V F Y L R G R S A R L N F P D Q L D G A G G G G A G A G G A E D H
 
AT3G50260.1     - - M S A A T I R K K A T E V G A Q V D A - - - - I G A T V - - - V Q - - - - - N N K R R R V F S Q K R D F G G G L L E
Os023742_Os06t0    R E L T A A V I R K K A A E V G A R V D A Q H S V V G A A A P V P L Q P P Q P P P P Q R R R T K N P - - - - - - - - - -
 
AT3G50260.1     L V D L N K L P D P E N L D D D L V G K
Os023742_Os06t0    - - D L N R E P T P D T S D D E - - - -
 
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