fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os019236 not found in 233aa AT2G23340.1 not_not 0.441696113 III
Os019235 not found in 233aa AT2G23340.1 not_not 0.441696113 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G50260.1     ---------------------------MDAGVAVKADVAVK-----------MKRERP--
Os019235_Os04t0 MQGEYHRSSSEDSAASAAAAAAAAAAAMAPLAAAAAAVAAKEEQAAAAAVLPLQQQQPRR
Os019236_Os04t0 MQGEYHRSSSEDSAASAAAAAAAAAAAMAPLAAAAAAVAAKEEQAAAAAVLPLQQQQPRR
                                           * . .*. * **.*           :::::*  

AT3G50260.1     -FKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLNFPEL
Os019235_Os04t0 QYRGVRMRKWGKWVAEIREPHKRTRIWLGSYATPVAAARAYDTAVFYLRGRSARLNFPEE
Os019236_Os04t0 QYRGVRMRKWGKWVAEIREPHKRTRIWLGSYATPVAAARAYDTAVFYLRGRSARLNFPEE
                 ::*:***************:**:*:*****:** *************** :* ***** 

AT3G50260.1     LPCTSAED---------------MSAATIRKKATEVGAQVDAI--GATVVQNNKRRRVFS
Os019235_Os04t0 ISSLASLSEGGGASEPREPDGGTLSAASIRKKAIEVGSRVDALQTGMMVAPTTHHRE--R
Os019236_Os04t0 ISSLASLSEGGGASEPREPDGGTLSAASIRKKAIEVGSRVDALQTGMMVAPTTHHRE--R
                :.. :: .               :***:***** ***::***:  *  *. ..::*.   

AT3G50260.1     QK----------------------------RDFGGGLLELVDLNKLPDPENLDDDLVGK
Os019235_Os04t0 QKHHHHHHHHHPHLQPHGEEQHHHHEQKHQRTAWSGRAKNPDLNQAPSPENSDAE----
Os019236_Os04t0 QKHHHHHHHHHPHLQPHGEEQHHHHEQKHQRTAWSGRAKNPDLNQAPSPENSDAE----
                **                            *   .*  :  ***: *.*** * :
BoxShade v3.31 C (beta, 970507) Output
AT3G50260.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - M D A G V A V K A D V A V K - - - - - - - - - - - M K R E R P - -
Os019235_Os04t0    M Q G E Y H R S S S E D S A A S A A A A A A A A A A A M A P L A A A A A A V A A K E E Q A A A A A V L P L Q Q Q Q P R R
Os019236_Os04t0    M Q G E Y H R S S S E D S A A S A A A A A A A A A A A M A P L A A A A A A V A A K E E Q A A A A A V L P L Q Q Q Q P R R
 
AT3G50260.1     - F K G I R M R K W G K W V A E I R E P N K R S R L W L G S Y S T P E A A A R A Y D T A V F Y L R G P T A T L N F P E L
Os019235_Os04t0    Q Y R G V R M R K W G K W V A E I R E P H K R T R I W L G S Y A T P V A A A R A Y D T A V F Y L R G R S A R L N F P E E
Os019236_Os04t0    Q Y R G V R M R K W G K W V A E I R E P H K R T R I W L G S Y A T P V A A A R A Y D T A V F Y L R G R S A R L N F P E E
 
AT3G50260.1     L P C T S A E D - - - - - - - - - - - - - - - M S A A T I R K K A T E V G A Q V D A I - - G A T V V Q N N K R R R V F S
Os019235_Os04t0    I S S L A S L S E G G G A S E P R E P D G G T L S A A S I R K K A I E V G S R V D A L Q T G M M V A P T T H H R E - - R
Os019236_Os04t0    I S S L A S L S E G G G A S E P R E P D G G T L S A A S I R K K A I E V G S R V D A L Q T G M M V A P T T H H R E - - R
 
AT3G50260.1     Q K - - - - - - - - - - - - - - - - - - - - - - - - - - - - R D F G G G L L E L V D L N K L P D P E N L D D D L V G K
Os019235_Os04t0    Q K H H H H H H H H H P H L Q P H G E E Q H H H H E Q K H Q R T A W S G R A K N P D L N Q A P S P E N S D A E - - - -
Os019236_Os04t0    Q K H H H H H H H H H P H L Q P H G E E Q H H H H E Q K H Q R T A W S G R A K N P D L N Q A P S P E N S D A E - - - -
 
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