fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os023742 not found in 184aa AT4G36900.1 1st_not 0.459363957 II
Os019236 not found in 233aa AT2G23340.1 not_not 0.441696113 III
Os019235 not found in 233aa AT2G23340.1 not_not 0.441696113 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G50260.1     ------------------------------------------MDAGVAVKADVA-VKMKR
Os019236_Os04t0 MQGEYHRSSSEDSAASAAAAAAAAAAAMAPLAAAAAAVAAKEEQAAAAAVLPL--QQQQP
Os019235_Os04t0 MQGEYHRSSSEDSAASAAAAAAAAAAAMAPLAAAAAAVAAKEEQAAAAAVLPL--QQQQP
Os023742_Os06t0 -------------------MDRREATVFLPPPPPPQPTQPQQQPAAAAVRAPVGGRGGGG
                                                            *..*.   :       

AT3G50260.1     ERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLNFP
Os019236_Os04t0 RRQYRGVRMRKWGKWVAEIREPHKRTRIWLGSYATPVAAARAYDTAVFYLRGRSARLNFP
Os019235_Os04t0 RRQYRGVRMRKWGKWVAEIREPHKRTRIWLGSYATPVAAARAYDTAVFYLRGRSARLNFP
Os023742_Os06t0 GRQYRGVRMRKWGKWVAEIREPNKRSRIWLGSYSTAVAAARAYDTAVFYLRGRSARLNFP
                 * ::*:***************:**:*:*****:*. *************** :* ****

AT3G50260.1     ELLPC--------TSAED--------MSAATIRKKATEVGAQVDAIGATV----------
Os019236_Os04t0 EEISSLASLSEG-GGASEPREPDGGTLSAASIRKKAIEVGSRVDALQTGM-MVAPTTHHR
Os019235_Os04t0 EEISSLASLSEG-GGASEPREPDGGTLSAASIRKKAIEVGSRVDALQTGM-MVAPTTHHR
Os023742_Os06t0 DQLDGAGGGGAGAGGAEDHRE-----LTAAVIRKKAAEVGARVDAQHSVVGAAAPVP---
                : :           .*.:        ::** ***** ***::***  : :          

AT3G50260.1     ---------------VQN-----------NKRRRVFSQKRDFGGGLLELVDLNKLPDPEN
Os019236_Os04t0 ERQKHHHHHHHHHPHLQPHGEEQHHHHEQKHQRTAWS-------GRAKNPDLNQAPSPEN
Os019235_Os04t0 ERQKHHHHHHHHHPHLQPHGEEQHHHHEQKHQRTAWS-------GRAKNPDLNQAPSPEN
Os023742_Os06t0 ---------------LQP-------PQPPPPQRR-----------RTKNPDLNREPTPDT
                               :*              :*              :  ***: * *:.

AT3G50260.1     LDDDLVGK
Os019236_Os04t0 SDAE----
Os019235_Os04t0 SDAE----
Os023742_Os06t0 SDDE----
                 * :
BoxShade v3.31 C (beta, 970507) Output
AT3G50260.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D A G V A V K A D V A - V K M K R
Os019236_Os04t0    M Q G E Y H R S S S E D S A A S A A A A A A A A A A A M A P L A A A A A A V A A K E E Q A A A A A V L P L - - Q Q Q Q P
Os019235_Os04t0    M Q G E Y H R S S S E D S A A S A A A A A A A A A A A M A P L A A A A A A V A A K E E Q A A A A A V L P L - - Q Q Q Q P
Os023742_Os06t0    - - - - - - - - - - - - - - - - - - - M D R R E A T V F L P P P P P P Q P T Q P Q Q Q P A A A A V R A P V G G R G G G G
 
AT3G50260.1     E R P F K G I R M R K W G K W V A E I R E P N K R S R L W L G S Y S T P E A A A R A Y D T A V F Y L R G P T A T L N F P
Os019236_Os04t0    R R Q Y R G V R M R K W G K W V A E I R E P H K R T R I W L G S Y A T P V A A A R A Y D T A V F Y L R G R S A R L N F P
Os019235_Os04t0    R R Q Y R G V R M R K W G K W V A E I R E P H K R T R I W L G S Y A T P V A A A R A Y D T A V F Y L R G R S A R L N F P
Os023742_Os06t0    G R Q Y R G V R M R K W G K W V A E I R E P N K R S R I W L G S Y S T A V A A A R A Y D T A V F Y L R G R S A R L N F P
 
AT3G50260.1     E L L P C - - - - - - - - T S A E D - - - - - - - - M S A A T I R K K A T E V G A Q V D A I G A T V - - - - - - - - - -
Os019236_Os04t0    E E I S S L A S L S E G - G G A S E P R E P D G G T L S A A S I R K K A I E V G S R V D A L Q T G M - M V A P T T H H R
Os019235_Os04t0    E E I S S L A S L S E G - G G A S E P R E P D G G T L S A A S I R K K A I E V G S R V D A L Q T G M - M V A P T T H H R
Os023742_Os06t0    D Q L D G A G G G G A G A G G A E D H R E - - - - - L T A A V I R K K A A E V G A R V D A Q H S V V G A A A P V P - - -
 
AT3G50260.1     - - - - - - - - - - - - - - - V Q N - - - - - - - - - - - N K R R R V F S Q K R D F G G G L L E L V D L N K L P D P E N
Os019236_Os04t0    E R Q K H H H H H H H H H P H L Q P H G E E Q H H H H E Q K H Q R T A W S - - - - - - - G R A K N P D L N Q A P S P E N
Os019235_Os04t0    E R Q K H H H H H H H H H P H L Q P H G E E Q H H H H E Q K H Q R T A W S - - - - - - - G R A K N P D L N Q A P S P E N
Os023742_Os06t0    - - - - - - - - - - - - - - - L Q P - - - - - - - P Q P P P P Q R R - - - - - - - - - - - R T K N P D L N R E P T P D T
 
AT3G50260.1     L D D D L V G K
Os019236_Os04t0    S D A E - - - -
Os019235_Os04t0    S D A E - - - -
Os023742_Os06t0    S D D E - - - -
 
0