fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb033446 not found in 424aa AT2G23340.1 1st_not 0.459363957 II
Sb030094 not found in 461aa AT2G23340.1 not_not 0.445229681 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G50260.1     -----------------------------------MDAGVAVKADVAVKMKRERPFKGIR
Sb030094_Sorbi1 RDGREGSQENHANAKSSCRYHCCCCCCTCLHNPQPPSAGPQVRAS---EREREKRQRLQQ
Sb033446_Sorbi1 ------PHDHH-------------------HHP------------------RRSGNKLLL
                                                                   *.   :   

AT3G50260.1     MRKWGKW------------VAEIREPNK-------------------RSRLW--------
Sb030094_Sorbi1 PAKAGAHAGR-VPVFQRGVGGRGRGSSSSSRSRCHGSSCGR------RSRRG--------
Sb033446_Sorbi1 PNQPGGWRGTPLP------SARRRSPRRLPRFRCRPRRCWAPVVERLRRRQGTAEAAAEV
                  : *               .. * .                     * *          

AT3G50260.1     -------------------------------LGS-------YSTPEAA-ARAYDTAVFYL
Sb030094_Sorbi1 ---EDGGGA----GCDGGG----RCGGAAAGVGA-------PAPPAAD-----AAASAVP
Sb033446_Sorbi1 EEEEEEGGSIAAFGCASGASGWRRSASRTSGRGSGWVPTPPPSPPRAPTTRPCSTSAAAP
                                                *:        :.* *       ::    

AT3G50260.1     R---------G---PTATLN---------------------------------FPELLPC
Sb030094_Sorbi1 RRAHAEVGQVGGGDPGAAQAHAHLAGVLRHGRGGGARLRHGRVLPSRPVGAAQLPRRDPL
Sb033446_Sorbi1 R---------GSTSPTSSTA-----------------------------------RRWPI
                *         *   * ::                                     .  * 

AT3G50260.1     TS----------------------------------------------------------
Sb030094_Sorbi1 AV-AVGGRARGRGDRPRRRWWRRRHAVRGVHPEEGHRGGVPRGRAPDRHDGAPAAPPRAP
Sb033446_Sorbi1 TPRATGTAARGRGSR---------------------------------------------
                :                                                           

AT3G50260.1     ---------AEDMSAATIRKK---ATEVGAQVDAIGATVVQNNKR------------RRV
Sb030094_Sorbi1 EAPPPPPPPPPPAAAACPRARGGGAPPAGAEAVAAAASVERARQEPGSKPGAEPRELRRR
Sb033446_Sorbi1 ---------PPPSARRRPRSAPASTRSTAALALASLAAVLPLRSRCRPTIAAAPRTPTST
                         .   :    *     :  ..* . *  *:*   ...               

AT3G50260.1     FSQKRDFGGGLLELVDLN-------------------KLPDPENLDDDLVGK
Sb030094_Sorbi1 VTSERASDTARLNVNDDVRYRLFPFPRRRPALQHMPLSSPSPRTYDDPS---
Sb033446_Sorbi1 GSPPRTPQTT----SDFVVVLLLPHPSTTLLVLR---QNYSPKG--------
                 :  *          *                     .  .*.
BoxShade v3.31 C (beta, 970507) Output
AT3G50260.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D A G V A V K A D V A V K M K R E R P F K G I R
Sb030094_Sorbi1    R D G R E G S Q E N H A N A K S S C R Y H C C C C C C T C L H N P Q P P S A G P Q V R A S - - - E R E R E K R Q R L Q Q
Sb033446_Sorbi1    - - - - - - P H D H H - - - - - - - - - - - - - - - - - - - H H P - - - - - - - - - - - - - - - - - - R R S G N K L L L
 
AT3G50260.1     M R K W G K W - - - - - - - - - - - - V A E I R E P N K - - - - - - - - - - - - - - - - - - - R S R L W - - - - - - - -
Sb030094_Sorbi1    P A K A G A H A G R - V P V F Q R G V G G R G R G S S S S S R S R C H G S S C G R - - - - - - R S R R G - - - - - - - -
Sb033446_Sorbi1    P N Q P G G W R G T P L P - - - - - - S A R R R S P R R L P R F R C R P R R C W A P V V E R L R R R Q G T A E A A A E V
 
AT3G50260.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L G S - - - - - - - Y S T P E A A - A R A Y D T A V F Y L
Sb030094_Sorbi1    - - - E D G G G A - - - - G C D G G G - - - - R C G G A A A G V G A - - - - - - - P A P P A A D - - - - - A A A S A V P
Sb033446_Sorbi1    E E E E E E G G S I A A F G C A S G A S G W R R S A S R T S G R G S G W V P T P P P S P P R A P T T R P C S T S A A A P
 
AT3G50260.1     R - - - - - - - - - G - - - P T A T L N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - F P E L L P C
Sb030094_Sorbi1    R R A H A E V G Q V G G G D P G A A Q A H A H L A G V L R H G R G G G A R L R H G R V L P S R P V G A A Q L P R R D P L
Sb033446_Sorbi1    R - - - - - - - - - G S T S P T S S T A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R R W P I
 
AT3G50260.1     T S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb030094_Sorbi1    A V - A V G G R A R G R G D R P R R R W W R R R H A V R G V H P E E G H R G G V P R G R A P D R H D G A P A A P P R A P
Sb033446_Sorbi1    T P R A T G T A A R G R G S R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G50260.1     - - - - - - - - - A E D M S A A T I R K K - - - A T E V G A Q V D A I G A T V V Q N N K R - - - - - - - - - - - - R R V
Sb030094_Sorbi1    E A P P P P P P P P P P A A A A C P R A R G G G A P P A G A E A V A A A A S V E R A R Q E P G S K P G A E P R E L R R R
Sb033446_Sorbi1    - - - - - - - - - P P P S A R R R P R S A P A S T R S T A A L A L A S L A A V L P L R S R C R P T I A A A P R T P T S T
 
AT3G50260.1     F S Q K R D F G G G L L E L V D L N - - - - - - - - - - - - - - - - - - - K L P D P E N L D D D L V G K
Sb030094_Sorbi1    V T S E R A S D T A R L N V N D D V R Y R L F P F P R R R P A L Q H M P L S S P S P R T Y D D P S - - -
Sb033446_Sorbi1    G S P P R T P Q T T - - - - S D F V V V L L L P H P S T T L L V L R - - - Q N Y S P K G - - - - - - - -
 
0