fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm001918 not found in 168aa AT4G36900.1 1st_not 0.579505300 II
Gm011914 not found in 150aa AT5G67190.1 not_not 0.565371024 III
Gm047356 not found in 147aa AT2G23340.1 not_not 0.558303886 III
Gm014043 not found in 159aa AT5G67190.1 not_not 0.533568904 III
Gm008859 not found in 160aa AT1G46768.1 not_not 0.519434628 III
Gm029915 not found in 153aa AT2G23340.1 not_not 0.508833922 III
Gm039398 not found in 174aa AT1G46768.1 not_not 0.501766784 III
Gm047992 not found in 174aa AT4G36900.1 not_not 0.498233215 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G50260.1     MD--AG-----VAVKADVAVKMKR----------------------ERPFKGIRMRKWGK
gm029915_Glyma1 MEG-EG---------------RRREGGERETATAAATRKVV-EGADQRRYKGIRMRKWGK
gm008859_Glyma0 ME--EAGLGDCCSSNSTI---TRK--------SDKRKQQHQ---QQEKPYRGIRMRKWGK
gm011914_Glyma0 MEG-EGG------------SATRKRGKDGETET-------------TTRYKGIRMRKWGK
gm047992_Glyma1 ME--ER--DHRCSNNSTMITTTKKKTSRRSPTSDKLKNQHPCEKQAMKPYRGIRMRKWGK
gm047356_Glyma1 MEGEEGG------------IATKKRGKEGETE--------------TTRYKGIRMRKWGK
gm001918_Glyma0 MES-EG----------------RREGGERE--TTAATRK-V-EGA-ERRYKGIRMRKWGK
gm014043_Glyma0 ME--EAGLGDCCSSNTTI---TRK--------SEKRKQQHQ---QQEKPYRGIRMRKWGK
gm039398_Glyma1 ME--DR--DHCCSNNSTMITTTKKRTGRRSPTSDKLKNQHR-EKQSMKPYRGIRMRKWGK
                *:                    ::                         ::*********

AT3G50260.1     WVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLNFPELLPCTSAE-----
gm029915_Glyma1 WVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPELLIGEGAA----A
gm008859_Glyma0 WVAEIREPNKRSRIWLGSYATPVAAARAYDTAVFHLRGPSARLNFPELLSQDDDV----S
gm011914_Glyma0 WVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPELLAAEGPA----A
gm047992_Glyma1 WVAEIREPNKRSRIWLGSYTTPMAAARAYDTAVFYLRGPTARLNFPELLFQDDQEEGNDS
gm047356_Glyma1 WVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFHLRGPSARLNFPELVAAEGPA----A
gm001918_Glyma0 WVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPELLVREGPA----A
gm014043_Glyma0 WVAEIREPNKRSRIWLGSYATPVAAARAYDTAVFHLRGPSARLNFPELLSQDDDV----S
gm039398_Glyma1 WVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPTARLNFPELLFQDDDQEGSDS
                *************:*****:** ***********:****:* ******:   .       

AT3G50260.1     --------DMSAATIRKKATEVGAQVDAIGATVVQNNKR-RRVFSQKRDFGGGLL---EL
gm029915_Glyma1 LTGG---CDMSAASIRKKASE---------------------LLSASCGGGSGDF-AVRV
gm008859_Glyma0 TQQQ---GNMSADSIRKKATQVGARVDALQTALQQSSSS----HSAN----SSHVSSSDK
gm011914_Glyma0 SDA-----VMSAASIRKKATEVGARVDALHRQ-DPHAPP------------AGEF-ADR-
gm047992_Glyma1 VQHGAAAGNMSADSIRRKATQVGARVDALQTALHHHAS------STN----S--L----K
gm047356_Glyma1 D--------MSAASIRKKATEVGARVDALHRQ-HPHALP------------AGEF-ADR-
gm001918_Glyma0 LVAG---CDMSAASIRKKATEVGARVDALQATLHHHYVPPRQLLSGG-GGGSGDF-PVRV
gm014043_Glyma0 TQQQ---GKMSADSIRKKATQVGARVDALQTALQQSSST----HSIS----SSHV-SYEK
gm039398_Glyma1 VQHG-AAGNMSADSIRRKATQVGARVDALQTALHHHAP------STN----SLNL----K
                         *** :**:**::                              .  .     

AT3G50260.1     VDLNKLPDPENLDD------DLVGK
gm029915_Glyma1 VDLNKMPEPES-SDCE-WNVN----
gm008859_Glyma0 PDLNEYPKPED--------------
gm011914_Glyma0 VDLNKIPEPEN-SDCDYWGGD----
gm047992_Glyma1 PDLNEFPKLESLQD-----------
gm047356_Glyma1 VDLNKMPEPEN-SDCDYWDRD----
gm001918_Glyma0 VDLNKMPEPES-SDCE-WDVN----
gm014043_Glyma0 PDLNEYPKPED--------------
gm039398_Glyma1 PDLNEFPKLEELQD-----------
                 ***: *. *.
BoxShade v3.31 C (beta, 970507) Output
AT3G50260.1     M D - - A G - - - - - V A V K A D V A V K M K R - - - - - - - - - - - - - - - - - - - - - - E R P F K G I R M R K W G K
gm029915_Glyma1    M E G - E G - - - - - - - - - - - - - - - R R R E G G E R E T A T A A A T R K V V - E G A D Q R R Y K G I R M R K W G K
gm008859_Glyma0    M E - - E A G L G D C C S S N S T I - - - T R K - - - - - - - - S D K R K Q Q H Q - - - Q Q E K P Y R G I R M R K W G K
gm011914_Glyma0    M E G - E G G - - - - - - - - - - - - S A T R K R G K D G E T E T - - - - - - - - - - - - - T T R Y K G I R M R K W G K
gm047992_Glyma1    M E - - E R - - D H R C S N N S T M I T T T K K K T S R R S P T S D K L K N Q H P C E K Q A M K P Y R G I R M R K W G K
gm047356_Glyma1    M E G E E G G - - - - - - - - - - - - I A T K K R G K E G E T E - - - - - - - - - - - - - - T T R Y K G I R M R K W G K
gm001918_Glyma0    M E S - E G - - - - - - - - - - - - - - - - R R E G G E R E - - T T A A T R K - V - E G A - E R R Y K G I R M R K W G K
gm014043_Glyma0    M E - - E A G L G D C C S S N T T I - - - T R K - - - - - - - - S E K R K Q Q H Q - - - Q Q E K P Y R G I R M R K W G K
gm039398_Glyma1    M E - - D R - - D H C C S N N S T M I T T T K K R T G R R S P T S D K L K N Q H R - E K Q S M K P Y R G I R M R K W G K
 
AT3G50260.1     W V A E I R E P N K R S R L W L G S Y S T P E A A A R A Y D T A V F Y L R G P T A T L N F P E L L P C T S A E - - - - -
gm029915_Glyma1    W V A E I R E P N K R S R I W L G S Y S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E L L I G E G A A - - - - A
gm008859_Glyma0    W V A E I R E P N K R S R I W L G S Y A T P V A A A R A Y D T A V F H L R G P S A R L N F P E L L S Q D D D V - - - - S
gm011914_Glyma0    W V A E I R E P N K R S R I W L G S Y S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E L L A A E G P A - - - - A
gm047992_Glyma1    W V A E I R E P N K R S R I W L G S Y T T P M A A A R A Y D T A V F Y L R G P T A R L N F P E L L F Q D D Q E E G N D S
gm047356_Glyma1    W V A E I R E P N K R S R I W L G S Y S T P V A A A R A Y D T A V F H L R G P S A R L N F P E L V A A E G P A - - - - A
gm001918_Glyma0    W V A E I R E P N K R S R I W L G S Y S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E L L V R E G P A - - - - A
gm014043_Glyma0    W V A E I R E P N K R S R I W L G S Y A T P V A A A R A Y D T A V F H L R G P S A R L N F P E L L S Q D D D V - - - - S
gm039398_Glyma1    W V A E I R E P N K R S R I W L G S Y T T P V A A A R A Y D T A V F Y L R G P T A R L N F P E L L F Q D D D Q E G S D S
 
AT3G50260.1     - - - - - - - - D M S A A T I R K K A T E V G A Q V D A I G A T V V Q N N K R - R R V F S Q K R D F G G G L L - - - E L
gm029915_Glyma1    L T G G - - - C D M S A A S I R K K A S E - - - - - - - - - - - - - - - - - - - - - L L S A S C G G G S G D F - A V R V
gm008859_Glyma0    T Q Q Q - - - G N M S A D S I R K K A T Q V G A R V D A L Q T A L Q Q S S S S - - - - H S A N - - - - S S H V S S S D K
gm011914_Glyma0    S D A - - - - - V M S A A S I R K K A T E V G A R V D A L H R Q - D P H A P P - - - - - - - - - - - - A G E F - A D R -
gm047992_Glyma1    V Q H G A A A G N M S A D S I R R K A T Q V G A R V D A L Q T A L H H H A S - - - - - - S T N - - - - S - - L - - - - K
gm047356_Glyma1    D - - - - - - - - M S A A S I R K K A T E V G A R V D A L H R Q - H P H A L P - - - - - - - - - - - - A G E F - A D R -
gm001918_Glyma0    L V A G - - - C D M S A A S I R K K A T E V G A R V D A L Q A T L H H H Y V P P R Q L L S G G - G G G S G D F - P V R V
gm014043_Glyma0    T Q Q Q - - - G K M S A D S I R K K A T Q V G A R V D A L Q T A L Q Q S S S T - - - - H S I S - - - - S S H V - S Y E K
gm039398_Glyma1    V Q H G - A A G N M S A D S I R R K A T Q V G A R V D A L Q T A L H H H A P - - - - - - S T N - - - - S L N L - - - - K
 
AT3G50260.1     V D L N K L P D P E N L D D - - - - - - D L V G K
gm029915_Glyma1    V D L N K M P E P E S - S D C E - W N V N - - - -
gm008859_Glyma0    P D L N E Y P K P E D - - - - - - - - - - - - - -
gm011914_Glyma0    V D L N K I P E P E N - S D C D Y W G G D - - - -
gm047992_Glyma1    P D L N E F P K L E S L Q D - - - - - - - - - - -
gm047356_Glyma1    V D L N K M P E P E N - S D C D Y W D R D - - - -
gm001918_Glyma0    V D L N K M P E P E S - S D C E - W D V N - - - -
gm014043_Glyma0    P D L N E Y P K P E D - - - - - - - - - - - - - -
gm039398_Glyma1    P D L N E F P K L E E L Q D - - - - - - - - - - -
 
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