fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50330.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm001899 not found in 241aa AT5G67060.1 1st_not 0.445103857 II
Gm047380 not found in 282aa AT3G50330.1 not_1st 0.421364985 II
Gm011924 not found in 235aa AT3G50330.1 not_1st 0.412462908 II
Pt018003 not found in 265aa AT3G50330.1 not_1st 0.403560830 II
Pt000432 not found in 263aa AT3G50330.1 not_1st 0.400593471 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G50330.1     MD---------NSDILMNMMMQQMEKLPEH------FSN---------------------
pt018003_POPTR_ MEIDLLKSATE----DQTEMMMMIDKFPE-------FYG---ACNDVADHLSPTDQFL--
gm011924_Glyma0 MDVDIVKTSSNNNNMDVMAMMMQME-----------------------------------
gm001899_Glyma0 MDVDKLKTSTSDSSMDMMMMMMQMEKFPE--FC-EPFYNNNTTTTTTTTLLYPENEYF--
gm047380_Glyma1 MDVDIVKTSNNNNNMDVMAMMMQMEKFPELLFCDDPFY--------TTTPTYQETDLLSS
pt000432_POPTR_ MDVDMMKSSSGEEHMDMMTMMMQMEKLPD--FCSEPFYN-----TTNTSTLLQEIQFS-N
                *:                 **  ::                                   

AT3G50330.1     -----------------SNPNPN--PHNIMMLSESNTHPFFFNPT---------HSHLPF
pt018003_POPTR_ --AASVSDSSVPHF-NTDNPHSANLPP---FMNLPSTLSFNSNNTPIQDQSPRAFISNPS
gm011924_Glyma0 ------------------NIVTTTPPPTTTLVDPTPS-NVVQFSK-IDDLFQHQHQQQPM
gm001899_Glyma0 ---LNSTTTTLPVFPNVNNPNVITPPPTTLINPPPPSSNFV--------------LQQPM
gm047380_Glyma1 GRSSSSTTSASTLF---NNNVTTTIPPTT-----TPSNNVVQFSN-IDDLFQ---QQPPM
pt000432_POPTR_ GNPTANTVASPPIW---HNPHASSPP----LINPPCSMPFMGTP-----------IQEPV
                                  *      *        . :  .                  * 

AT3G50330.1     DQT------MPHHQPGLNFRYA-PSPS--SSLP--EKRGGCSDNANMAAMREMIFRIAVM
pt018003_POPTR_ TSRWRGVGELP----GTANDYATPS----------RKK------NSMAAMREMIFRIAAM
gm011924_Glyma0 SQS------LQ------------PYPS--------EKK------NSMAAMREMIFRIAVM
gm001899_Glyma0 TPH------LE------------PNP---------EKK------NSVAAMREMIFRVAVM
gm047380_Glyma1 SQSL----QLQ------------PYPS--------EKKK--KNNNSMAAMREMIFRIAVM
pt000432_POPTR_ TPS------LQHDMMAKKFEYGTPFSNANSFLSSIEKK------NSTTTIREMIFRIAAM
                         :             *           .*:       . :::******:*.*

AT3G50330.1     QPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLD
pt018003_POPTR_ QPIHIDPESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLD
gm011924_Glyma0 QPVHIDPESIKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLD
gm001899_Glyma0 QPVHIDPESIKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLD
gm047380_Glyma1 QPVHIDPESIKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLD
pt000432_POPTR_ QPAHIDPESVKPPKRKNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLD
                ** ******:*****:**:*****************************************

AT3G50330.1     EAIHYVKFLKKQVQSLEEHAV-------------VN--------GGGM-TAVAGGALAG-
pt018003_POPTR_ EAIHYVKFLKTQVQSLERAQA----------------NRPTATTGIGFPVAM--------
gm011924_Glyma0 EAIHYVKFLKKQVQTLEQAGANTSPHSNTNSPN----NHVVG--AAGFPLGMSSNYSNN-
gm001899_Glyma0 EAIHYVKFLKKQVQTLEQAGA----------------TRPLN--VVGFPTTV-SNANNN-
gm047380_Glyma1 EAIHYVKFLKKQVQTLEQAGANRSPHSSNNNNNILNTTHVVG--AVGFPLGMSSNYSNNI
pt000432_POPTR_ EAIHYVKFLKMQVQSLEQTGA----------------NRPMG--GFGI-TGV--------
                ********** ***:**.  .                         *:   :        

AT3G50330.1     -TVGGGY-------GGKGCGIMRSDHHQMLGNAQILR
pt018003_POPTR_ --TSGSYLPVGKGCHQQPAHHHHHQNVQHYGDA----
gm011924_Glyma0 --SSVNYSSLLMKGGCQPCQMFGSTSKQLLS------
gm001899_Glyma0 ----VNYSSFVKS--CQPYPML---------------
gm047380_Glyma1 ISNVVNY-SLLMKGGCQPCQVFGSTSKQLLS------
pt000432_POPTR_ TMPSVGYSSLVKN--FDPAANTEGTMQMLR-------
                     .*         .
BoxShade v3.31 C (beta, 970507) Output
AT3G50330.1     M D - - - - - - - - - N S D I L M N M M M Q Q M E K L P E H - - - - - - F S N - - - - - - - - - - - - - - - - - - - - -
pt018003_POPTR_    M E I D L L K S A T E - - - - D Q T E M M M M I D K F P E - - - - - - - F Y G - - - A C N D V A D H L S P T D Q F L - -
gm011924_Glyma0    M D V D I V K T S S N N N N M D V M A M M M Q M E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm001899_Glyma0    M D V D K L K T S T S D S S M D M M M M M M Q M E K F P E - - F C - E P F Y N N N T T T T T T T T L L Y P E N E Y F - -
gm047380_Glyma1    M D V D I V K T S N N N N N M D V M A M M M Q M E K F P E L L F C D D P F Y - - - - - - - - T T T P T Y Q E T D L L S S
pt000432_POPTR_    M D V D M M K S S S G E E H M D M M T M M M Q M E K L P D - - F C S E P F Y N - - - - - T T N T S T L L Q E I Q F S - N
 
AT3G50330.1     - - - - - - - - - - - - - - - - - S N P N P N - - P H N I M M L S E S N T H P F F F N P T - - - - - - - - - H S H L P F
pt018003_POPTR_    - - A A S V S D S S V P H F - N T D N P H S A N L P P - - - F M N L P S T L S F N S N N T P I Q D Q S P R A F I S N P S
gm011924_Glyma0    - - - - - - - - - - - - - - - - - - N I V T T T P P P T T T L V D P T P S - N V V Q F S K - I D D L F Q H Q H Q Q Q P M
gm001899_Glyma0    - - - L N S T T T T L P V F P N V N N P N V I T P P P T T L I N P P P P S S N F V - - - - - - - - - - - - - - L Q Q P M
gm047380_Glyma1    G R S S S S T T S A S T L F - - - N N N V T T T I P P T T - - - - - T P S N N V V Q F S N - I D D L F Q - - - Q Q P P M
pt000432_POPTR_    G N P T A N T V A S P P I W - - - H N P H A S S P P - - - - L I N P P C S M P F M G T P - - - - - - - - - - - I Q E P V
 
AT3G50330.1     D Q T - - - - - - M P H H Q P G L N F R Y A - P S P S - - S S L P - - E K R G G C S D N A N M A A M R E M I F R I A V M
pt018003_POPTR_    T S R W R G V G E L P - - - - G T A N D Y A T P S - - - - - - - - - - R K K - - - - - - N S M A A M R E M I F R I A A M
gm011924_Glyma0    S Q S - - - - - - L Q - - - - - - - - - - - - P Y P S - - - - - - - - E K K - - - - - - N S M A A M R E M I F R I A V M
gm001899_Glyma0    T P H - - - - - - L E - - - - - - - - - - - - P N P - - - - - - - - - E K K - - - - - - N S V A A M R E M I F R V A V M
gm047380_Glyma1    S Q S L - - - - Q L Q - - - - - - - - - - - - P Y P S - - - - - - - - E K K K - - K N N N S M A A M R E M I F R I A V M
pt000432_POPTR_    T P S - - - - - - L Q H D M M A K K F E Y G T P F S N A N S F L S S I E K K - - - - - - N S T T T I R E M I F R I A A M
 
AT3G50330.1     Q P I H I D P E S V K P P K R K N V R I S K D P Q S V A A R H R R E R I S E R I R I L Q R L V P G G T K M D T A S M L D
pt018003_POPTR_    Q P I H I D P E S V K P P K R R N V K I S K D P Q S V A A R H R R E R I S E R I R I L Q R L V P G G T K M D T A S M L D
gm011924_Glyma0    Q P V H I D P E S I K P P K R R N V K I S K D P Q S V A A R H R R E R I S E R I R I L Q R L V P G G T K M D T A S M L D
gm001899_Glyma0    Q P V H I D P E S I K P P K R R N V K I S K D P Q S V A A R H R R E R I S E R I R I L Q R L V P G G T K M D T A S M L D
gm047380_Glyma1    Q P V H I D P E S I K P P K R R N V K I S K D P Q S V A A R H R R E R I S E R I R I L Q R L V P G G T K M D T A S M L D
pt000432_POPTR_    Q P A H I D P E S V K P P K R K N V K I S K D P Q S V A A R H R R E R I S E R I R I L Q R L V P G G T K M D T A S M L D
 
AT3G50330.1     E A I H Y V K F L K K Q V Q S L E E H A V - - - - - - - - - - - - - V N - - - - - - - - G G G M - T A V A G G A L A G -
pt018003_POPTR_    E A I H Y V K F L K T Q V Q S L E R A Q A - - - - - - - - - - - - - - - - N R P T A T T G I G F P V A M - - - - - - - -
gm011924_Glyma0    E A I H Y V K F L K K Q V Q T L E Q A G A N T S P H S N T N S P N - - - - N H V V G - - A A G F P L G M S S N Y S N N -
gm001899_Glyma0    E A I H Y V K F L K K Q V Q T L E Q A G A - - - - - - - - - - - - - - - - T R P L N - - V V G F P T T V - S N A N N N -
gm047380_Glyma1    E A I H Y V K F L K K Q V Q T L E Q A G A N R S P H S S N N N N N I L N T T H V V G - - A V G F P L G M S S N Y S N N I
pt000432_POPTR_    E A I H Y V K F L K M Q V Q S L E Q T G A - - - - - - - - - - - - - - - - N R P M G - - G F G I - T G V - - - - - - - -
 
AT3G50330.1     - T V G G G Y - - - - - - - G G K G C G I M R S D H H Q M L G N A Q I L R
pt018003_POPTR_    - - T S G S Y L P V G K G C H Q Q P A H H H H H Q N V Q H Y G D A - - - -
gm011924_Glyma0    - - S S V N Y S S L L M K G G C Q P C Q M F G S T S K Q L L S - - - - - -
gm001899_Glyma0    - - - - V N Y S S F V K S - - C Q P Y P M L - - - - - - - - - - - - - - -
gm047380_Glyma1    I S N V V N Y - S L L M K G G C Q P C Q V F G S T S K Q L L S - - - - - -
pt000432_POPTR_    T M P S V G Y S S L V K N - - F D P A A N T E G T M Q M L R - - - - - - -
 
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