fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50330.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm029934 not found in 242aa AT5G67060.1 not_not 0.433234421 III
Gm008844 not found in 217aa AT5G67060.1 not_not 0.403560830 III
Pt038588 not found in 261aa AT5G67060.1 not_not 0.406528189 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G50330.1     MD--------NSDILMNMM--MQQMEKLPEH---FSNSNPNPN-----PHNIMMLSESNT
gm029934_Glyma1 MDVDILKTSTSDNISMDMMMTMMQMEKFPEFCEPFYNNNNNTSTAPLYPENELLINSTTT
pt038588_POPTR_ MEIDQLRS--ATEDQMEMM---MLMDKLPEFYDSYNDVADHLS-----PTEFLAASASN-
gm008844_Glyma0 --MEQLKP---EEYQMDVM--TMMLQQLPQLSEPYTHTMEGFH-----PPE---------
                            :  *::*     ::::*:    : .           * :         

AT3G50330.1     HPFFFN-----------PTHSHLPFDQTM-PH---HQPGLNFR-----------------
gm029934_Glyma1 LPVFSNVINNPNVITPPPSSSNFIQQQPMTPH---LEPNL--------------------
pt038588_POPTR_ -----------------ISISHFNTDN---PHNASSPPFMNLQSTLSSNSNSTPTQDQSP
gm008844_Glyma0 --------------------DHFYEQQ---QH----------------------------
                                    .::  ::    *                            

AT3G50330.1     --YAPSPSSSL----------------PEKRGGCSDNANMAAMREMIFRIAVMQPIHIDP
gm029934_Glyma1 ----------------------------EKRN------SVAAMREMIFRVAVMQPIHIDP
pt038588_POPTR_ QDFFPSPSSSRWRGLGELPEANDYATPSQKKN------SMATMREMIFRIAAMQPIQIDP
gm008844_Glyma0 -----SPSETY-----EDANANPYG--GEKRS------SMAAMREMIFRMAAMQPIHIDP
                                            :*:.      .:*:*******:*.****:***

AT3G50330.1     ESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVK
gm029934_Glyma1 ESIKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVK
pt038588_POPTR_ ESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVK
gm008844_Glyma0 ESVKQPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVK
                **:* ***:**:************************************************

AT3G50330.1     FLKKQVQSLEEH-AV------V-------NGGGMTAVAGGALAGTVGGGYGG--KGCG--
gm029934_Glyma1 FLKKQVQTLEQA-GAS---RPL-------NVVGFPTTASNA---NNNNSYSGFVKSC---
pt038588_POPTR_ FLKTQVQSLERF-QAN---RPTTT-----TGIGFPVAMTSG---S----YLPMGKGYHQP
gm008844_Glyma0 FLKTQVQSLQRASSANNNIRPLGTSTVNATGIGFPVAMSTT---SNSTPYFPLPKPYQ--
                ***.***:*:.   .              .  *:...       .    *    *     

AT3G50330.1     -IMRSDHHQMLGNA---QILR
gm029934_Glyma1 -----QPYPMLGSAASKQLLS
pt038588_POPTR_ PARRRQNVQNYGDA-------
gm008844_Glyma0 -ARHMENMHDRYD--------
                     :      .
BoxShade v3.31 C (beta, 970507) Output
AT3G50330.1     M D - - - - - - - - N S D I L M N M M - - M Q Q M E K L P E H - - - F S N S N P N P N - - - - - P H N I M M L S E S N T
gm029934_Glyma1    M D V D I L K T S T S D N I S M D M M M T M M Q M E K F P E F C E P F Y N N N N N T S T A P L Y P E N E L L I N S T T T
pt038588_POPTR_    M E I D Q L R S - - A T E D Q M E M M - - - M L M D K L P E F Y D S Y N D V A D H L S - - - - - P T E F L A A S A S N -
gm008844_Glyma0    - - M E Q L K P - - - E E Y Q M D V M - - T M M L Q Q L P Q L S E P Y T H T M E G F H - - - - - P P E - - - - - - - - -
 
AT3G50330.1     H P F F F N - - - - - - - - - - - P T H S H L P F D Q T M - P H - - - H Q P G L N F R - - - - - - - - - - - - - - - - -
gm029934_Glyma1    L P V F S N V I N N P N V I T P P P S S S N F I Q Q Q P M T P H - - - L E P N L - - - - - - - - - - - - - - - - - - - -
pt038588_POPTR_    - - - - - - - - - - - - - - - - - I S I S H F N T D N - - - P H N A S S P P F M N L Q S T L S S N S N S T P T Q D Q S P
gm008844_Glyma0    - - - - - - - - - - - - - - - - - - - - D H F Y E Q Q - - - Q H - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G50330.1     - - Y A P S P S S S L - - - - - - - - - - - - - - - - P E K R G G C S D N A N M A A M R E M I F R I A V M Q P I H I D P
gm029934_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - E K R N - - - - - - S V A A M R E M I F R V A V M Q P I H I D P
pt038588_POPTR_    Q D F F P S P S S S R W R G L G E L P E A N D Y A T P S Q K K N - - - - - - S M A T M R E M I F R I A A M Q P I Q I D P
gm008844_Glyma0    - - - - - S P S E T Y - - - - - E D A N A N P Y G - - G E K R S - - - - - - S M A A M R E M I F R M A A M Q P I H I D P
 
AT3G50330.1     E S V K P P K R K N V R I S K D P Q S V A A R H R R E R I S E R I R I L Q R L V P G G T K M D T A S M L D E A I H Y V K
gm029934_Glyma1    E S I K P P K R R N V K I S K D P Q S V A A R H R R E R I S E R I R I L Q R L V P G G T K M D T A S M L D E A I H Y V K
pt038588_POPTR_    E S V K P P K R R N V K I S K D P Q S V A A R H R R E R I S E R I R I L Q R L V P G G T K M D T A S M L D E A I H Y V K
gm008844_Glyma0    E S V K Q P K R R N V K I S K D P Q S V A A R H R R E R I S E R I R I L Q R L V P G G T K M D T A S M L D E A I H Y V K
 
AT3G50330.1     F L K K Q V Q S L E E H - A V - - - - - - V - - - - - - - N G G G M T A V A G G A L A G T V G G G Y G G - - K G C G - -
gm029934_Glyma1    F L K K Q V Q T L E Q A - G A S - - - R P L - - - - - - - N V V G F P T T A S N A - - - N N N N S Y S G F V K S C - - -
pt038588_POPTR_    F L K T Q V Q S L E R F - Q A N - - - R P T T T - - - - - T G I G F P V A M T S G - - - S - - - - Y L P M G K G Y H Q P
gm008844_Glyma0    F L K T Q V Q S L Q R A S S A N N N I R P L G T S T V N A T G I G F P V A M S T T - - - S N S T P Y F P L P K P Y Q - -
 
AT3G50330.1     - I M R S D H H Q M L G N A - - - Q I L R
gm029934_Glyma1    - - - - - Q P Y P M L G S A A S K Q L L S
pt038588_POPTR_    P A R R R Q N V Q N Y G D A - - - - - - -
gm008844_Glyma0    - A R H M E N M H D R Y D - - - - - - - -
 
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