fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50330.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp014280 not found in 451aa AT3G50330.1 1st_1st 0.281899109 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G50330.1     ------------------MDNSDI-----------------LMNMMMQQ-----------
pp014280_Pp1s67 MTLSLRPDDRGALRSMEKWSNSEIGWGNYQHHPMLETSMNPLLNYSQSQSVFPQLMGAAD
                                   .**:*                 *:*   .*           

AT3G50330.1     MEKLPEHFSNSNPN----------------------------------PNPHNIMM-LSE
pp014280_Pp1s67 QQSLMEAFAQANAGCMLNQPSQGGGDSLDTLLKSSNSSSMVDSSTSEMTSPDNYCVGAPE
                 :.* * *:::*..                                  ..*.*  :  .*

AT3G50330.1     SNTH-------------PFFFN-------------------------------PTHSHLP
pp014280_Pp1s67 NNLHMNCISSLGGGPVSPVLTNMLDRTASTGACLVAAHQQSKSEFFRMESPGGPLSPGAP
                .* *             *.: *                               *  .  *

AT3G50330.1     ----------------------FD----------------QTMPHHQ-------------
pp014280_Pp1s67 PCGESEDSLHGGEASMTGLKRRFDGGDKNWMVDQMHGSRKQQKPQLQQSEKALGFQDSVG
                                      **                *  *: *             

AT3G50330.1     --------PGLNFRYA----------PSPSSSLPE-KRGGCSDNANM---AAMREMIFRI
pp014280_Pp1s67 GFVDAASTAGMPGKYSDLATVPSVMQPPPLSFLPSIAAGGASSGVDIDKFASVRAILFRH
                        .*:  :*:          *.* * **.   **.*...::   *::* ::** 

AT3G50330.1     AVMQPIHIDPE-SVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTA
pp014280_Pp1s67 A-SQPIPTLEEIASSRPKRRNVRISKDPQSVAARHRRERISDRIRVLQRLVPGGTKMDTA
                *  ***    * : . ***:*********************:***:**************

AT3G50330.1     SMLDEAIHYVKFLKKQVQSLEE--------HAVVNGGGMTAVAGGALAGTVG--------
pp014280_Pp1s67 SMLDEAIHYVKFLKLQLQTLEQIGNNCCDPRSFPQQGS----AAEELASLVRPFDLNCTA
                ************** *:*:**:        ::. : *.    *.  **. *         

AT3G50330.1     ------------GGYGGKGCGIMRSDHHQMLGNAQILR
pp014280_Pp1s67 AFQTWPIPPATMGNHGDTSTKWGTEANQATFSDGRM--
                            *.:*...     . ::  :.:.::
BoxShade v3.31 C (beta, 970507) Output
AT3G50330.1     - - - - - - - - - - - - - - - - - - M D N S D I - - - - - - - - - - - - - - - - - L M N M M M Q Q - - - - - - - - - - -
pp014280_Pp1s67    M T L S L R P D D R G A L R S M E K W S N S E I G W G N Y Q H H P M L E T S M N P L L N Y S Q S Q S V F P Q L M G A A D
 
AT3G50330.1     M E K L P E H F S N S N P N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P N P H N I M M - L S E
pp014280_Pp1s67    Q Q S L M E A F A Q A N A G C M L N Q P S Q G G G D S L D T L L K S S N S S S M V D S S T S E M T S P D N Y C V G A P E
 
AT3G50330.1     S N T H - - - - - - - - - - - - - P F F F N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P T H S H L P
pp014280_Pp1s67    N N L H M N C I S S L G G G P V S P V L T N M L D R T A S T G A C L V A A H Q Q S K S E F F R M E S P G G P L S P G A P
 
AT3G50330.1     - - - - - - - - - - - - - - - - - - - - - - F D - - - - - - - - - - - - - - - - Q T M P H H Q - - - - - - - - - - - - -
pp014280_Pp1s67    P C G E S E D S L H G G E A S M T G L K R R F D G G D K N W M V D Q M H G S R K Q Q K P Q L Q Q S E K A L G F Q D S V G
 
AT3G50330.1     - - - - - - - - P G L N F R Y A - - - - - - - - - - P S P S S S L P E - K R G G C S D N A N M - - - A A M R E M I F R I
pp014280_Pp1s67    G F V D A A S T A G M P G K Y S D L A T V P S V M Q P P P L S F L P S I A A G G A S S G V D I D K F A S V R A I L F R H
 
AT3G50330.1     A V M Q P I H I D P E - S V K P P K R K N V R I S K D P Q S V A A R H R R E R I S E R I R I L Q R L V P G G T K M D T A
pp014280_Pp1s67    A - S Q P I P T L E E I A S S R P K R R N V R I S K D P Q S V A A R H R R E R I S D R I R V L Q R L V P G G T K M D T A
 
AT3G50330.1     S M L D E A I H Y V K F L K K Q V Q S L E E - - - - - - - - H A V V N G G G M T A V A G G A L A G T V G - - - - - - - -
pp014280_Pp1s67    S M L D E A I H Y V K F L K L Q L Q T L E Q I G N N C C D P R S F P Q Q G S - - - - A A E E L A S L V R P F D L N C T A
 
AT3G50330.1     - - - - - - - - - - - - G G Y G G K G C G I M R S D H H Q M L G N A Q I L R
pp014280_Pp1s67    A F Q T W P I P P A T M G N H G D T S T K W G T E A N Q A T F S D G R M - -
 
0