fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50330.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt018003 not found in 265aa AT3G50330.1 not_1st 0.403560830 II
Pt000432 not found in 263aa AT3G50330.1 not_1st 0.400593471 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G50330.1     MDNSDILMNM----------MMQQMEKLPE-----------------------------H
pt018003_POPTR_ ME-IDLLKSAT----EDQTEMMMMIDKFPEFYGACNDVADHLSPTDQFLAASVSDSSVPH
pt000432_POPTR_ MD-VDMMKSSSGEEHMDMMTMMMQMEKLPDF---CSEPFYNTTNTSTLLQEI-------Q
                *:  *:: .           **  ::*:*:                             :

AT3G50330.1     FSNSNPNPNP-------HNIMMLSESNTHPFFFNPTHSHLPFDQTMPHHQPGLNFRYAPS
pt018003_POPTR_ FNTDNPH-----------------SANLPPFMNLPSTLSFNSNNTPIQDQSPRAFISNPS
pt000432_POPTR_ FSNGNPTANTVASPPIWHNP----HASSPPLINPPC--SMPFMGTPIQEPVTPSLQHDMM
                *...**                   :.  *::  *    :    *  :.     :     

AT3G50330.1     PS-----SSLPEKRGGCSDNA-------NMAAMREMIFRIAVMQPIHIDPESVKPPKRKN
pt018003_POPTR_ TSRWRGVGELP---GTANDYATPSRKKNSMAAMREMIFRIAAMQPIHIDPESVKPPKRRN
pt000432_POPTR_ AKKFE--YGTP--FSNANSFLSSIEKKNSTTTIREMIFRIAAMQPAHIDPESVKPPKRKN
                ..        *   . ...         . :::********.*** ************:*

AT3G50330.1     VRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLE
pt018003_POPTR_ VKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE
pt000432_POPTR_ VKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKMQVQSLE
                *:*************************************************** ******

AT3G50330.1     EHAVVNGGGMTAVAGGALAGTVGGGY-------GGKGCGIMRSDHH-----QMLGNAQIL
pt018003_POPTR_ R-AQANRPTATTGIGFPVAMT-SGSYL-----PVGKGCHQQPAHHHHHQNVQHYGDA---
pt000432_POPTR_ Q-TGANRPMGGFGITGVTMPSVGYSSLVKNFDPAA----------------NTEGTMQML
                . : .*              : . .         .                :  *     

AT3G50330.1     R
pt018003_POPTR_ -
pt000432_POPTR_ R
BoxShade v3.31 C (beta, 970507) Output
AT3G50330.1     M D N S D I L M N M - - - - - - - - - - M M Q Q M E K L P E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - H
pt018003_POPTR_    M E - I D L L K S A T - - - - E D Q T E M M M M I D K F P E F Y G A C N D V A D H L S P T D Q F L A A S V S D S S V P H
pt000432_POPTR_    M D - V D M M K S S S G E E H M D M M T M M M Q M E K L P D F - - - C S E P F Y N T T N T S T L L Q E I - - - - - - - Q
 
AT3G50330.1     F S N S N P N P N P - - - - - - - H N I M M L S E S N T H P F F F N P T H S H L P F D Q T M P H H Q P G L N F R Y A P S
pt018003_POPTR_    F N T D N P H - - - - - - - - - - - - - - - - - S A N L P P F M N L P S T L S F N S N N T P I Q D Q S P R A F I S N P S
pt000432_POPTR_    F S N G N P T A N T V A S P P I W H N P - - - - H A S S P P L I N P P C - - S M P F M G T P I Q E P V T P S L Q H D M M
 
AT3G50330.1     P S - - - - - S S L P E K R G G C S D N A - - - - - - - N M A A M R E M I F R I A V M Q P I H I D P E S V K P P K R K N
pt018003_POPTR_    T S R W R G V G E L P - - - G T A N D Y A T P S R K K N S M A A M R E M I F R I A A M Q P I H I D P E S V K P P K R R N
pt000432_POPTR_    A K K F E - - Y G T P - - F S N A N S F L S S I E K K N S T T T I R E M I F R I A A M Q P A H I D P E S V K P P K R K N
 
AT3G50330.1     V R I S K D P Q S V A A R H R R E R I S E R I R I L Q R L V P G G T K M D T A S M L D E A I H Y V K F L K K Q V Q S L E
pt018003_POPTR_    V K I S K D P Q S V A A R H R R E R I S E R I R I L Q R L V P G G T K M D T A S M L D E A I H Y V K F L K T Q V Q S L E
pt000432_POPTR_    V K I S K D P Q S V A A R H R R E R I S E R I R I L Q R L V P G G T K M D T A S M L D E A I H Y V K F L K M Q V Q S L E
 
AT3G50330.1     E H A V V N G G G M T A V A G G A L A G T V G G G Y - - - - - - - G G K G C G I M R S D H H - - - - - Q M L G N A Q I L
pt018003_POPTR_    R - A Q A N R P T A T T G I G F P V A M T - S G S Y L - - - - - P V G K G C H Q Q P A H H H H H Q N V Q H Y G D A - - -
pt000432_POPTR_    Q - T G A N R P M G G F G I T G V T M P S V G Y S S L V K N F D P A A - - - - - - - - - - - - - - - - N T E G T M Q M L
 
AT3G50330.1     R
pt018003_POPTR_    -
pt000432_POPTR_    R
 
0