fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50330.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt036263 not found in 239aa AT3G50330.1 1st_1st 0.412462908 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G50330.1     MDNSDIL--------MNMM--MQQMEKLPE-------------------HFSNSNPNP--
pt036263_POPTR_ MD-VDMMKSSSGEENMDMMTVMMQMEKLPDFCSEPFHNTTNTSTILQEIQFSNGNPTSIV
                **  *::        *:**  * ******:                   :***.**..  

AT3G50330.1     --------NPHNIMMLSESNTHPFFFNPTHSHLPFDQT---------MPHHQPGLNFRYA
pt036263_POPTR_ ASPPIYHNNPH--------ASSPPFINPPPCSMPFMGTPIQEPMTPPLQHNMMANKFKYS
                        ***         : * *:**. . :**  *         : *:  . :*:*:

AT3G50330.1     PSPSSSLPEKRGGCSDNAN-----------MAAMREMIFRIAVMQPIHIDPESVKPPKRK
pt036263_POPTR_ -TPFS-----------NANSFLSSIEKKNPTAEIRDMTFRIAAMQPIHIDPESVKPPKRR
                 :* *           ***            * :*:* ****.****************:

AT3G50330.1     NVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL
pt036263_POPTR_ NVKISKDPQSVAARHRRERISERMRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL
                **:********************:************************************

AT3G50330.1     EEHAVVNGGGMTAVAGGALAGTVGGGYGGKGCGIMRSDHHQMLGNAQILR
pt036263_POPTR_ EQ---------------AGANTPNGWF-----WLYRGD------NA----
                *:               * *.* .* :      : *.*      **
BoxShade v3.31 C (beta, 970507) Output
AT3G50330.1     M D N S D I L - - - - - - - - M N M M - - M Q Q M E K L P E - - - - - - - - - - - - - - - - - - - H F S N S N P N P - -
pt036263_POPTR_    M D - V D M M K S S S G E E N M D M M T V M M Q M E K L P D F C S E P F H N T T N T S T I L Q E I Q F S N G N P T S I V
 
AT3G50330.1     - - - - - - - - N P H N I M M L S E S N T H P F F F N P T H S H L P F D Q T - - - - - - - - - M P H H Q P G L N F R Y A
pt036263_POPTR_    A S P P I Y H N N P H - - - - - - - - A S S P P F I N P P P C S M P F M G T P I Q E P M T P P L Q H N M M A N K F K Y S
 
AT3G50330.1     P S P S S S L P E K R G G C S D N A N - - - - - - - - - - - M A A M R E M I F R I A V M Q P I H I D P E S V K P P K R K
pt036263_POPTR_    - T P F S - - - - - - - - - - - N A N S F L S S I E K K N P T A E I R D M T F R I A A M Q P I H I D P E S V K P P K R R
 
AT3G50330.1     N V R I S K D P Q S V A A R H R R E R I S E R I R I L Q R L V P G G T K M D T A S M L D E A I H Y V K F L K K Q V Q S L
pt036263_POPTR_    N V K I S K D P Q S V A A R H R R E R I S E R M R I L Q R L V P G G T K M D T A S M L D E A I H Y V K F L K K Q V Q S L
 
AT3G50330.1     E E H A V V N G G G M T A V A G G A L A G T V G G G Y G G K G C G I M R S D H H Q M L G N A Q I L R
pt036263_POPTR_    E Q - - - - - - - - - - - - - - - A G A N T P N G W F - - - - - W L Y R G D - - - - - - N A - - - -
 
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