fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50330.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm001899 not found in 241aa AT5G67060.1 1st_not 0.445103857 II
Gm047380 not found in 282aa AT3G50330.1 not_1st 0.421364985 II
Gm011924 not found in 235aa AT3G50330.1 not_1st 0.412462908 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G50330.1     MD---------NSDILMNMMMQQMEKLPE------HFSNSNPNPN-------PHNIMML-
gm011924_Glyma0 MDVDIVKTSSNNNNMDVMAMMMQME-----------------------------------
gm001899_Glyma0 MDVDKLKTSTSDSSMDMMMMMMQMEKFPE--FC-EPFYNNNTTTTTTTTLLYPENEYF--
gm047380_Glyma1 MDVDIVKTSNNNNNMDVMAMMMQMEKFPELLFCDDPFY--------TTTPTYQETDLLSS
                **         :..: :  ** ***                                   

AT3G50330.1     -----SESNTHPFF---FNPTHSHLPFDQTMPHHQPGLNFR-------------------
gm011924_Glyma0 ------------------NIVTTTPPPTTTLVDPTPS-NVVQFSKIDDLFQHQHQQQPMS
gm001899_Glyma0 ---LNSTTTTLPVFPNVNNPNVITPPPTTLINPPPPSSNFV-------------LQQPMT
gm047380_Glyma1 GRSSSSTTSASTLF---NNNVTTTIPPTT-----TPSNNVVQFSNIDDLFQ---QQPPMS
                                  *      *         *. *.                    

AT3G50330.1     ----YAPSPSSSLPEKRGGCSDNANMAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRIS
gm011924_Glyma0 QS--LQPYPS----EKK------NSMAAMREMIFRIAVMQPVHIDPESIKPPKRRNVKIS
gm001899_Glyma0 PH--LEPNP-----EKK------NSVAAMREMIFRVAVMQPVHIDPESIKPPKRRNVKIS
gm047380_Glyma1 QSLQLQPYPS----EKKK--KNNNSMAAMREMIFRIAVMQPVHIDPESIKPPKRRNVKIS
                      * *     **:       .:*********:*****:******:*****:**:**

AT3G50330.1     KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEE---
gm011924_Glyma0 KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGA
gm001899_Glyma0 KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGA
gm047380_Glyma1 KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGA
                *****************************************************:**:   

AT3G50330.1     ----HAVVNGGG----MTAVAGGALAGTVGGGYGGK---------------GCGIMRSDH
gm011924_Glyma0 NTSPHSNTNSPN----NHVVGAAGFPLGMSSNYSNN---SSVNYSSLLMKGGC-----QP
gm001899_Glyma0 ----------------TRPLNVVGFPTTV-SNANNN-----VNYSSFVKS--C-----QP
gm047380_Glyma1 NRSPHSSNNNNNILNTTHVVGAVGFPLGMSSNYSNNIISNVVNY-SLLMKGGC-----QP
                                   :   .:.  : .. ..:                *     : 

AT3G50330.1     HQMLGNA--QILR
gm011924_Glyma0 CQMFGSTSKQLLS
gm001899_Glyma0 YPML---------
gm047380_Glyma1 CQVFGSTSKQLLS
                  ::
BoxShade v3.31 C (beta, 970507) Output
AT3G50330.1     M D - - - - - - - - - N S D I L M N M M M Q Q M E K L P E - - - - - - H F S N S N P N P N - - - - - - - P H N I M M L -
gm011924_Glyma0    M D V D I V K T S S N N N N M D V M A M M M Q M E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm001899_Glyma0    M D V D K L K T S T S D S S M D M M M M M M Q M E K F P E - - F C - E P F Y N N N T T T T T T T T L L Y P E N E Y F - -
gm047380_Glyma1    M D V D I V K T S N N N N N M D V M A M M M Q M E K F P E L L F C D D P F Y - - - - - - - - T T T P T Y Q E T D L L S S
 
AT3G50330.1     - - - - - S E S N T H P F F - - - F N P T H S H L P F D Q T M P H H Q P G L N F R - - - - - - - - - - - - - - - - - - -
gm011924_Glyma0    - - - - - - - - - - - - - - - - - - N I V T T T P P P T T T L V D P T P S - N V V Q F S K I D D L F Q H Q H Q Q Q P M S
gm001899_Glyma0    - - - L N S T T T T L P V F P N V N N P N V I T P P P T T L I N P P P P S S N F V - - - - - - - - - - - - - L Q Q P M T
gm047380_Glyma1    G R S S S S T T S A S T L F - - - N N N V T T T I P P T T - - - - - T P S N N V V Q F S N I D D L F Q - - - Q Q P P M S
 
AT3G50330.1     - - - - Y A P S P S S S L P E K R G G C S D N A N M A A M R E M I F R I A V M Q P I H I D P E S V K P P K R K N V R I S
gm011924_Glyma0    Q S - - L Q P Y P S - - - - E K K - - - - - - N S M A A M R E M I F R I A V M Q P V H I D P E S I K P P K R R N V K I S
gm001899_Glyma0    P H - - L E P N P - - - - - E K K - - - - - - N S V A A M R E M I F R V A V M Q P V H I D P E S I K P P K R R N V K I S
gm047380_Glyma1    Q S L Q L Q P Y P S - - - - E K K K - - K N N N S M A A M R E M I F R I A V M Q P V H I D P E S I K P P K R R N V K I S
 
AT3G50330.1     K D P Q S V A A R H R R E R I S E R I R I L Q R L V P G G T K M D T A S M L D E A I H Y V K F L K K Q V Q S L E E - - -
gm011924_Glyma0    K D P Q S V A A R H R R E R I S E R I R I L Q R L V P G G T K M D T A S M L D E A I H Y V K F L K K Q V Q T L E Q A G A
gm001899_Glyma0    K D P Q S V A A R H R R E R I S E R I R I L Q R L V P G G T K M D T A S M L D E A I H Y V K F L K K Q V Q T L E Q A G A
gm047380_Glyma1    K D P Q S V A A R H R R E R I S E R I R I L Q R L V P G G T K M D T A S M L D E A I H Y V K F L K K Q V Q T L E Q A G A
 
AT3G50330.1     - - - - H A V V N G G G - - - - M T A V A G G A L A G T V G G G Y G G K - - - - - - - - - - - - - - - G C G I M R S D H
gm011924_Glyma0    N T S P H S N T N S P N - - - - N H V V G A A G F P L G M S S N Y S N N - - - S S V N Y S S L L M K G G C - - - - - Q P
gm001899_Glyma0    - - - - - - - - - - - - - - - - T R P L N V V G F P T T V - S N A N N N - - - - - V N Y S S F V K S - - C - - - - - Q P
gm047380_Glyma1    N R S P H S S N N N N N I L N T T H V V G A V G F P L G M S S N Y S N N I I S N V V N Y - S L L M K G G C - - - - - Q P
 
AT3G50330.1     H Q M L G N A - - Q I L R
gm011924_Glyma0    C Q M F G S T S K Q L L S
gm001899_Glyma0    Y P M L - - - - - - - - -
gm047380_Glyma1    C Q V F G S T S K Q L L S
 
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