fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50330.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm029934 not found in 242aa AT5G67060.1 not_not 0.433234421 III
Gm008844 not found in 217aa AT5G67060.1 not_not 0.403560830 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G50330.1     MD--------NSDILMNMM--MQQMEKLPEH---FSNSNPNPN-----PHNIMMLSESNT
gm029934_Glyma1 MDVDILKTSTSDNISMDMMMTMMQMEKFPEFCEPFYNNNNNTSTAPLYPENELLINSTTT
gm008844_Glyma0 ME--QLK---PEEYQMDVM--TMMLQQLPQLSEPY----------------------THT
                *:         .:  *::*     ::::*:    :                      : *

AT3G50330.1     HPFFFN-----------PTHSHLPFDQTM-P---HHQPGLNFRYAPSPSSSLPEKRGGCS
gm029934_Glyma1 LPVFSNVINNPNVITPPPSSSNFIQQQPMTP---HLEPNL-------------EKRN---
gm008844_Glyma0 MEGFH------------PPEDHFYEQQQHSPSETYEDANAN------PYGG--EKRS---
                   *             *. .::  :*   *   : :..              ***.   

AT3G50330.1     DNANMAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRI
gm029934_Glyma1 ---SVAAMREMIFRVAVMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRRERISERIRI
gm008844_Glyma0 ---SMAAMREMIFRMAAMQPIHIDPESVKQPKRRNVKISKDPQSVAARHRRERISERIRI
                   .:*********:*.**********:* ***:**:***********************

AT3G50330.1     LQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEEHAV-------V-------NGGGMT
gm029934_Glyma1 LQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGAS----RPL-------NVVGFP
gm008844_Glyma0 LQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLQRASSANNNIRPLGTSTVNATGIGFP
                ****************************.***:*:. .        :       .  *:.

AT3G50330.1     AVAGGALAGTVGGGYGG--KGCGIMRSDHHQMLGNA---QILR
gm029934_Glyma1 TTASNA---NNNNSYSGFVKSC-----QPYPMLGSAASKQLLS
gm008844_Glyma0 VAMSTT---SNSTPYFPLPKPY---QARHMENMHDRYD-----
                .. . :   . .  *    *            : .
BoxShade v3.31 C (beta, 970507) Output
AT3G50330.1     M D - - - - - - - - N S D I L M N M M - - M Q Q M E K L P E H - - - F S N S N P N P N - - - - - P H N I M M L S E S N T
gm029934_Glyma1    M D V D I L K T S T S D N I S M D M M M T M M Q M E K F P E F C E P F Y N N N N N T S T A P L Y P E N E L L I N S T T T
gm008844_Glyma0    M E - - Q L K - - - P E E Y Q M D V M - - T M M L Q Q L P Q L S E P Y - - - - - - - - - - - - - - - - - - - - - - T H T
 
AT3G50330.1     H P F F F N - - - - - - - - - - - P T H S H L P F D Q T M - P - - - H H Q P G L N F R Y A P S P S S S L P E K R G G C S
gm029934_Glyma1    L P V F S N V I N N P N V I T P P P S S S N F I Q Q Q P M T P - - - H L E P N L - - - - - - - - - - - - - E K R N - - -
gm008844_Glyma0    M E G F H - - - - - - - - - - - - P P E D H F Y E Q Q Q H S P S E T Y E D A N A N - - - - - - P Y G G - - E K R S - - -
 
AT3G50330.1     D N A N M A A M R E M I F R I A V M Q P I H I D P E S V K P P K R K N V R I S K D P Q S V A A R H R R E R I S E R I R I
gm029934_Glyma1    - - - S V A A M R E M I F R V A V M Q P I H I D P E S I K P P K R R N V K I S K D P Q S V A A R H R R E R I S E R I R I
gm008844_Glyma0    - - - S M A A M R E M I F R M A A M Q P I H I D P E S V K Q P K R R N V K I S K D P Q S V A A R H R R E R I S E R I R I
 
AT3G50330.1     L Q R L V P G G T K M D T A S M L D E A I H Y V K F L K K Q V Q S L E E H A V - - - - - - - V - - - - - - - N G G G M T
gm029934_Glyma1    L Q R L V P G G T K M D T A S M L D E A I H Y V K F L K K Q V Q T L E Q A G A S - - - - R P L - - - - - - - N V V G F P
gm008844_Glyma0    L Q R L V P G G T K M D T A S M L D E A I H Y V K F L K T Q V Q S L Q R A S S A N N N I R P L G T S T V N A T G I G F P
 
AT3G50330.1     A V A G G A L A G T V G G G Y G G - - K G C G I M R S D H H Q M L G N A - - - Q I L R
gm029934_Glyma1    T T A S N A - - - N N N N S Y S G F V K S C - - - - - Q P Y P M L G S A A S K Q L L S
gm008844_Glyma0    V A M S T T - - - S N S T P Y F P L P K P Y - - - Q A R H M E N M H D R Y D - - - - -
 
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