fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50410.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm003204 not found in 204aa AT3G50410.1 not_1st 0.453681710 II
Pt002429 not found in 253aa AT3G50410.1 not_1st 0.453681710 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G50410.1     MPT--SDSGEPRR--IAMKP--NGVTVPISDQQEQLPCPRCDSSNTKFCYYNNYNFSQPR
gm003204_Glyma0 MPS--SNSGESRR---ASKPQSSGGAAPPPPEQENLPCPRCDSTNTKFCYYNNYNYSQPR
pt002429_POPTR_ MPTELSSSEKTRRPPLSTTPTSNKPGGAPPQEQEHLPCPRCDSTNTKFCYYNNYNFSQPR
                **:  *.* :.**   : .*  .    . . :**:********:***********:****

AT3G50410.1     HFCKACRRYWTHGGTLRDVPVGGGTRKSAKRSRT--CSNSSSSSVSGVVSNSN--GVPLQ
gm003204_Glyma0 HFCKSCRRYWTHGGTLRDIPVGGGSRKNAKRSRTHHVAATSSSSTSSTMTNGN--G----
pt002429_POPTR_ HFCKSCRRYWTHGGTLRDIPVGGGTRKNAKRSRT---SATTAASFAGPIIDNNIDNLPLP
                ****:*************:*****:**.******   : ::::* :. : :.*  .    

AT3G50410.1     TTPVLFPQSSISNGVTHTVTESDGKGS----ALSLCGSFTSTLLNHNAAATATHGSGSVI
gm003204_Glyma0 ---------------------------------NVCGSFTSLLNN-------THGSG-FL
pt002429_POPTR_ ATPVLVPLTASQGFSVHFGGGSDGKGNGGCGSGALGGSFTSLLN--------TPGPAGIL
                                                  : ***** *         * *.. .:

AT3G50410.1     GIGGFGIGLGSGFDDVSFGLGRAMWPFSTVGTATTTNVGSNGGHHAVPMP-ATWQFEGLE
gm003204_Glyma0 ALGGF--GLGHGYDDMGFGIGRSGWAFPGM-----VDGGNIGGAVASSGL-NTWQLESGE
pt002429_POPTR_ ALGRFGHGLGHGLEDVGCGLGRGLWSFPGIGDSG-AGVGGHGGVTVTAGLDNTWQFGSAG
                .:* *  *** * :*:. *:**. *.*. :     .. *. **  . .    ***: .  

AT3G50410.1     SNAGGGFVSGEYFAWPDLSITTPGNSLK
gm003204_Glyma0 ----GGFVSGDCFAWPGLAISTPGNGLK
pt002429_POPTR_ Q---NGFVGGDCFSWPELAISTPANGFK
                    .***.*: *:** *:*:**.*.:*
BoxShade v3.31 C (beta, 970507) Output
AT3G50410.1     M P T - - S D S G E P R R - - I A M K P - - N G V T V P I S D Q Q E Q L P C P R C D S S N T K F C Y Y N N Y N F S Q P R
gm003204_Glyma0    M P S - - S N S G E S R R - - - A S K P Q S S G G A A P P P P E Q E N L P C P R C D S T N T K F C Y Y N N Y N Y S Q P R
pt002429_POPTR_    M P T E L S S S E K T R R P P L S T T P T S N K P G G A P P Q E Q E H L P C P R C D S T N T K F C Y Y N N Y N F S Q P R
 
AT3G50410.1     H F C K A C R R Y W T H G G T L R D V P V G G G T R K S A K R S R T - - C S N S S S S S V S G V V S N S N - - G V P L Q
gm003204_Glyma0    H F C K S C R R Y W T H G G T L R D I P V G G G S R K N A K R S R T H H V A A T S S S S T S S T M T N G N - - G - - - -
pt002429_POPTR_    H F C K S C R R Y W T H G G T L R D I P V G G G T R K N A K R S R T - - - S A T T A A S F A G P I I D N N I D N L P L P
 
AT3G50410.1     T T P V L F P Q S S I S N G V T H T V T E S D G K G S - - - - A L S L C G S F T S T L L N H N A A A T A T H G S G S V I
gm003204_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - N V C G S F T S L L N N - - - - - - - T H G S G - F L
pt002429_POPTR_    A T P V L V P L T A S Q G F S V H F G G G S D G K G N G G C G S G A L G G S F T S L L N - - - - - - - - T P G P A G I L
 
AT3G50410.1     G I G G F G I G L G S G F D D V S F G L G R A M W P F S T V G T A T T T N V G S N G G H H A V P M P - A T W Q F E G L E
gm003204_Glyma0    A L G G F - - G L G H G Y D D M G F G I G R S G W A F P G M - - - - - V D G G N I G G A V A S S G L - N T W Q L E S G E
pt002429_POPTR_    A L G R F G H G L G H G L E D V G C G L G R G L W S F P G I G D S G - A G V G G H G G V T V T A G L D N T W Q F G S A G
 
AT3G50410.1     S N A G G G F V S G E Y F A W P D L S I T T P G N S L K
gm003204_Glyma0    - - - - G G F V S G D C F A W P G L A I S T P G N G L K
pt002429_POPTR_    Q - - - N G F V G G D C F S W P E L A I S T P A N G F K
 
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