fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G50410.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm044750 not found in 236aa AT3G50410.1 1st_1st 0.453681710 Ia
Pt036659 not found in 248aa AT3G50410.1 1st_1st 0.489311163 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G50410.1     MPT--SDSGEPRRIA-------MKPN-GVTVPISDQQEQLPCPRCDSSNTKFCYYNNYNF
pt036659_POPTR_ MPAELSSSEAARRAQQSTAATLTKPG---GAP-PQEQEHLPCPRCDSTNTKFCYYNNYNF
gm044750_Glyma1 MPS--SNSGESRRA--------SKPHRSVAAP-PVEPENLPCPRCDSANTKFCYYNNYNY
                **:  *.*  .**          **     .* . : *:********:***********:

AT3G50410.1     SQPRHFCKACRRYWTHGGTLRDVPVGGGTRKSAKRSRT---CSNSSSSSVSGVVSNSN--
pt036659_POPTR_ SQPRHFCKSCRRYWTHGGTLRDIPVGGGTRKNAKRSRT----SATSPASFMGPMTGTNID
gm044750_Glyma1 SQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKRSRTHHAAAATSSSSSTSSATTSAHE
                ********:*************:*****:**.******    : :*.:*  .  : :   

AT3G50410.1     GVPLQTTPVLFPQSSISNGVTHTVTESDGKGSALSLCGSFTSTLLNHNAAATATHGSGSV
pt036659_POPTR_ GLPLPATPVLLPLTANQGLSVHFG-GGDGKGNGGGLGGSFTSLL-N-------TQGPAGF
gm044750_Glyma1 HHNAHTLTALAPVTA----ATHFGHDGDVKQTNGNACGSYTSLLNN-------TQG-SGF
                     : ..* * ::     .*    .* * .  .  **:** * *       *:* ...

AT3G50410.1     IGIGGFGIGLGSGFDDVSFGLGRAMWPFSTVGTATTTNVGSN-GGHHAVPMP-ATWQFEG
pt036659_POPTR_ LALNGFGLGIGPGIEDVNFALGRGLWPFPGMGDVGAS-VGGN-GGAAVTAGLGNTWQF--
gm044750_Glyma1 FALGGFGLGLGHGFDDMGFGIGRSGWAFPGMVD------NGNIGGAIASSGV-NTWQL--
                :.:.***:*:* *::*:.*.:**. *.*. :        ..* **  . .    ***:  

AT3G50410.1     LESNAGGGFVSGEYFAWPDLSITTPGNSLK
pt036659_POPTR_ -ENGQENGFVGGDCFSWPDLAISTPGNGLK
gm044750_Glyma1 -ESG-EGGFVGGDCFSWPGLAISTPGNGLK
                 *..  .***.*: *:**.*:*:****.**
BoxShade v3.31 C (beta, 970507) Output
AT3G50410.1     M P T - - S D S G E P R R I A - - - - - - - M K P N - G V T V P I S D Q Q E Q L P C P R C D S S N T K F C Y Y N N Y N F
pt036659_POPTR_    M P A E L S S S E A A R R A Q Q S T A A T L T K P G - - - G A P - P Q E Q E H L P C P R C D S T N T K F C Y Y N N Y N F
gm044750_Glyma1    M P S - - S N S G E S R R A - - - - - - - - S K P H R S V A A P - P V E P E N L P C P R C D S A N T K F C Y Y N N Y N Y
 
AT3G50410.1     S Q P R H F C K A C R R Y W T H G G T L R D V P V G G G T R K S A K R S R T - - - C S N S S S S S V S G V V S N S N - -
pt036659_POPTR_    S Q P R H F C K S C R R Y W T H G G T L R D I P V G G G T R K N A K R S R T - - - - S A T S P A S F M G P M T G T N I D
gm044750_Glyma1    S Q P R H F C K S C R R Y W T H G G T L R D I P V G G G S R K N A K R S R T H H A A A A T S S S S S T S S A T T S A H E
 
AT3G50410.1     G V P L Q T T P V L F P Q S S I S N G V T H T V T E S D G K G S A L S L C G S F T S T L L N H N A A A T A T H G S G S V
pt036659_POPTR_    G L P L P A T P V L L P L T A N Q G L S V H F G - G G D G K G N G G G L G G S F T S L L - N - - - - - - - T Q G P A G F
gm044750_Glyma1    H H N A H T L T A L A P V T A - - - - A T H F G H D G D V K Q T N G N A C G S Y T S L L N N - - - - - - - T Q G - S G F
 
AT3G50410.1     I G I G G F G I G L G S G F D D V S F G L G R A M W P F S T V G T A T T T N V G S N - G G H H A V P M P - A T W Q F E G
pt036659_POPTR_    L A L N G F G L G I G P G I E D V N F A L G R G L W P F P G M G D V G A S - V G G N - G G A A V T A G L G N T W Q F - -
gm044750_Glyma1    F A L G G F G L G L G H G F D D M G F G I G R S G W A F P G M V D - - - - - - N G N I G G A I A S S G V - N T W Q L - -
 
AT3G50410.1     L E S N A G G G F V S G E Y F A W P D L S I T T P G N S L K
pt036659_POPTR_    - E N G Q E N G F V G G D C F S W P D L A I S T P G N G L K
gm044750_Glyma1    - E S G - E G G F V G G D C F S W P G L A I S T P G N G L K
 
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